Gene Bamb_3551 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_3551 
Symbol 
ID4312447 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp374673 
End bp375800 
Gene Length1128 bp 
Protein Length375 aa 
Translation table11 
GC content72% 
IMG OID638151393 
ProductFAD dependent oxidoreductase 
Protein accessionYP_775439 
Protein GI115358301 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGAGG CAAGGACCGA CGTCGTCGTG ATCGGCGCTG GCATCGTCGG CGCCGCATGT 
GCGCATGAAC TCGCGCAGCG TGGGCTGCGC GTGCTCGTCG TCGACGACGC CAGCGGCGGC
GCGACCGGCG CCGGCATGGG GCACCTGGTC GCGATGGACG ACAACGCGGC CGAACTCGCA
CTGAGCCATT ACTCGATCGA GCTATGGCGC GCGTTGAGCG GCGACATGCC GGAAGGCTGC
GCGTACCGCA ACTGCGGCAC GCTGTGGCTC GCGGCCGATT CCAACGAGAT GGACCTCGCG
CGCACCAAGC AGGCGACGCT CGCCGCGCAT GGCGTCGCAG GCGAGCTGAT CGACGCGGCG
ACGCTCGCGC GGCTGGAGCC GATGCTGCGC GCGGGGCTCG GCGGCGCGCT GAAGATCCCG
GGCGATGCGA TTCTCTATGC GCCGGTCGCC GCGAGCTGGC TGTTGCAGCG CGCGCCGGGC
ATCACGTTGC GGCGCGACCG CGCGGTGGCG GTCGACGGCC CGAGCGTGAC GCTTGCGAGC
GGCGACACGC TGCGCGCGGA ACGCGTCGTC GTCGCGAACG GCGTCGCCGC GCGCACGCTG
TTGCCTGAAT TGCCGCTGCG CCCGAAGAAG GGCCATCTGC TGATCACCGA CCGCTACCCG
GGCCAGGTGT CGCACCAGCT CGTCGAGCTC GGCTATGCGG CAAGCGCGCA CGCGAGCGAC
GGCACGTCCG TCGCGTTCAA CGTGCAACCG CGGCCGACCG GCCAGCTGCT GATCGGCTCG
TCGCGCCAGT TCGACACGGA AGACGCGCGC ATCGAGCCGC CGGTGCTCGC GCGCATGCTG
CGCCGTGCGG CCGGCTACCT GCCGGATCTG GCCGACCTGA ACGGGATTCG CGCATGGACG
GGCTTTCGTT CCGCGAGCCC CGACGGCTTG CCGCTGCTGG GCGAACATCC GGCGCGGCCG
GGCGTGTGGC TCGCGGTCGG CCACGAAGGG CTCGGCGTGA CGACCGCGCC GGGCAGCGCG
CGACTTGTCG CCGCGTTGAT GACCGGCGAG CGGCCGCCGA TCGATATCGA ACCGTATTTG
CCGGGACGTT TCCTGACGAC GTCACCCGTA GCCGGAGCGC TGACATGA
 
Protein sequence
MSEARTDVVV IGAGIVGAAC AHELAQRGLR VLVVDDASGG ATGAGMGHLV AMDDNAAELA 
LSHYSIELWR ALSGDMPEGC AYRNCGTLWL AADSNEMDLA RTKQATLAAH GVAGELIDAA
TLARLEPMLR AGLGGALKIP GDAILYAPVA ASWLLQRAPG ITLRRDRAVA VDGPSVTLAS
GDTLRAERVV VANGVAARTL LPELPLRPKK GHLLITDRYP GQVSHQLVEL GYAASAHASD
GTSVAFNVQP RPTGQLLIGS SRQFDTEDAR IEPPVLARML RRAAGYLPDL ADLNGIRAWT
GFRSASPDGL PLLGEHPARP GVWLAVGHEG LGVTTAPGSA RLVAALMTGE RPPIDIEPYL
PGRFLTTSPV AGALT