| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3550 |
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| Symbol | |
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| ID | 4312446 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 373741 |
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| End bp | 374676 |
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| Gene Length | 936 bp |
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| Protein Length | 311 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638151392 |
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| Product | hydroxyproline-2-epimerase |
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| Protein accession | YP_775438 |
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| Protein GI | 115358300 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3938] Proline racemase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGAAGC GCATTCAGAT CATCGATTCG CACACGGGCG GCGAACCCAC GCGGCTCGTC
GTGTCCGGCT TCCCCTCGCT CGGCAACGGC ACGATGGCCG AGCGCCGCGA CGTGCTCGCG
CGCGAGCACA ATCGCTACCG CACCGCGTGC ATTCTCGAGC CGCGCGGTAG CGATGTGATG
GTCGGCGCGC TGCTGTGCGA ACCCGTGTCG CCGGAGGCTG CGGCCGGCGT GATCTTCTTC
AACAACAGCG GCTACCTCGG GATGTGCGGG CACGGCACGA TCGGCGTCGT GCGCACGCTG
CATCACATGG GCCGCATCGA GCCGGGCGTG CACCGGATCG AAACGCCGGT CGGCACCGTC
GAGGCGACGC TGCACGACGA CCTGTCGGTC AGCGTGCGCA ACGTGCTCGC GTATCGCCAT
GCGAAGGCCG TTGCCGTCGA CGTGCCGGGC TACGGCCCCG TGAAGGGCGA CATCGCGTGG
GGCGGCAACT GGTTCTTCCT GATCAGCGAT CACGGCCAGC GCGTGGCCGG CGACAACGTC
GCCGCGCTGA CCGCCTATTC GTCCGCCGTG CGCGAAGGGC TCGAGCGCGC GGGCATCACC
GGCGCGAACG GCGGCGAGAT CGACCATATC GAACTGTTCG CCGACGATGC CGAGCACGAC
AGCCGCAGCT TCGTGCTGTG CCCGGGCCAT GCGTACGACC GTTCGCCGTG CGGCACCGGC
ACGAGCGCGA AGCTCGCCTG CCTCGCGGCC GACGGCAAGC TCGAACCGGG CGTCGTGTGG
CGGCAGGCGA GCGTGATCGG CAGCGTGTTC CAGGCGAGCT ATGCGCAGGC CGACGGCGGC
ATCGTGCCGA CGATTCGCGG CAGTGCGCAT CTCAGCGCGG AAGCGACGTT GCTGATCGAG
GAAGACGATC CGTTCGGCTG GGGCATCGTG TCGTGA
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| Protein sequence | MMKRIQIIDS HTGGEPTRLV VSGFPSLGNG TMAERRDVLA REHNRYRTAC ILEPRGSDVM
VGALLCEPVS PEAAAGVIFF NNSGYLGMCG HGTIGVVRTL HHMGRIEPGV HRIETPVGTV
EATLHDDLSV SVRNVLAYRH AKAVAVDVPG YGPVKGDIAW GGNWFFLISD HGQRVAGDNV
AALTAYSSAV REGLERAGIT GANGGEIDHI ELFADDAEHD SRSFVLCPGH AYDRSPCGTG
TSAKLACLAA DGKLEPGVVW RQASVIGSVF QASYAQADGG IVPTIRGSAH LSAEATLLIE
EDDPFGWGIV S
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