| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3543 |
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| Symbol | |
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| ID | 4312439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 363212 |
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| End bp | 364762 |
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| Gene Length | 1551 bp |
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| Protein Length | 516 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 638151385 |
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| Product | RNA polymerase, sigma 38 subunit, RpoS |
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| Protein accession | YP_775431 |
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| Protein GI | 115358293 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.582452 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTACGC CACGCCCCAC GCTTCGGGCG GACACGCCCC TCGATCCGAT CATCCAGCTG
CTGGCGCTCG CCGGCGAACA GGGTTATCTG ACGCACGCCG ACCTCGTCGA CGCGCTGCCG
CCGGAAAGCG ACAGCCCCGA CGCGCTGGAC GTCGTGCGCG CCGCGCTCGC GGACATCGGC
ATCGCCGTCC TCGACGAGCC GGCCTCGCCG GCGCCGTTCG CGGGCGCGGC ACCGGTCGAC
GTCGATCGCG ATGCGCTCGA CGAGGGCCGC GCGCTGCTCG GCGATCTCGC CCGCGGCACG
AGCGCGTCGA CCGATCCGCT CGCGCTCTAT ATGCGACGCA TTCATGCGGT GCCGCTGCTC
AAGCGCGAGG ACGAAATCGT GCTCGCCCGC GAGATCGAAA CGGGCCGCCA TCAGATCCTG
CACGCGCTCG CCGGCTATCC GGCGGCGGTC GATGCGCTGC TCGCGCGCCA TGGTGCAACG
GGTGGAAGCG TCGCGGCCGG AGACGAAGCC GATGACAGCC GCGACGGCGA AGGCGACACG
CCGGCACCCG CGCGCTACGA CACGCTGCAG GCCGCCATCA CGGCCCTGCG CGCCGCATTG
CACGCGCAAG GCTGCCGCTC AGCCGAATAC CGCGACGCGC GCAACCGCCT CGCCGCACTG
CTCGGTTCGC TCGCGTGGGT TGCGCCGGCC GTCGACGATG CGAGCCGCAT CGTGCGCGCG
CTTGCCACCG CGCCGGCCAA TGCCGCCGCC GACAGCGACG CCGCATGCTT CGACGCAGTC
GCGCGCCGTG CGCTCGGCGC CGCGCTGAGC GACGGTCAGC AAAAGGTACG CGACGGTACC
CGCGCGATGC TGGAGGCGAA CCTGCGGCTC GTGCTGTCGA TCGCGCGCAA GTACATGAAC
CGCGGCGTTG ACCTGCCCGA CCTCGTGCAG GACGGCTGCC TCGGCCTGAT GCGGGCGATC
GAGAAGTTCG AATACCGGCG CGGCTTCAAG TTCTCGACCT ATGCGACCTG GTGGATCCGG
CAGGCGGTCG CACGCGCGGT AGCCGACCGT TCGCGCACGA TCCGCGTGCC CGTGCACGTC
GGCGACCAGT ACCAGCGCGT GCAGCGGCAT GCGCTGCGCT TTCGCCAACG CACGGGCCGC
CGCGCGACGC CGGCCGAACT GGCCGCCGAA TCCGGGCTCC CCGAGGGCAA GCTGCGTGCG
GTGCTCGCGC TGCCTGCCGA GCCGCTGTCG CTCGACACGC CGCTGCCCGA CGCGGAGACG
GGCCTCGTCG ACCTGATCGA GGACCAGGCG TCGGCGAGCC CGTTCGAGCG CCTCGCGGAC
ACGCGCATGC GCGAATGCGT GACGTCGCTG CTGCGCTCGG TCACGCCGGC CGAAGCCGAC
GTGCTGCGTC GGCGGTTCGG CCTCGGTGGC GCCGAGCCCG ACACCTACGA CGCGATCGCG
CAGGACGCGG GCATGTCGCG CGAACGCGTG CGGCAGATCG AGAAGCGCGC GCTCGCCACG
CTGCGCACGG CTGCGGAAGC CGAGGGCGCG GAGTCGTTCC TCGACGCGTA A
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| Protein sequence | MTTPRPTLRA DTPLDPIIQL LALAGEQGYL THADLVDALP PESDSPDALD VVRAALADIG
IAVLDEPASP APFAGAAPVD VDRDALDEGR ALLGDLARGT SASTDPLALY MRRIHAVPLL
KREDEIVLAR EIETGRHQIL HALAGYPAAV DALLARHGAT GGSVAAGDEA DDSRDGEGDT
PAPARYDTLQ AAITALRAAL HAQGCRSAEY RDARNRLAAL LGSLAWVAPA VDDASRIVRA
LATAPANAAA DSDAACFDAV ARRALGAALS DGQQKVRDGT RAMLEANLRL VLSIARKYMN
RGVDLPDLVQ DGCLGLMRAI EKFEYRRGFK FSTYATWWIR QAVARAVADR SRTIRVPVHV
GDQYQRVQRH ALRFRQRTGR RATPAELAAE SGLPEGKLRA VLALPAEPLS LDTPLPDAET
GLVDLIEDQA SASPFERLAD TRMRECVTSL LRSVTPAEAD VLRRRFGLGG AEPDTYDAIA
QDAGMSRERV RQIEKRALAT LRTAAEAEGA ESFLDA
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