Gene Bamb_3519 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_3519 
Symbol 
ID4312415 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp333287 
End bp334717 
Gene Length1431 bp 
Protein Length476 aa 
Translation table11 
GC content66% 
IMG OID638151361 
Producthypothetical protein 
Protein accessionYP_775407 
Protein GI115358269 
COG category[S] Function unknown 
COG ID[COG2308] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGAACA ATTCGATGAA ACCGTTCGAT GAAATGCTGC AATCCGGCGA CATGGTGAGA 
CCGCCTTACG CGCGCCTCAA GCAGTGGCTC GACACGCAGA ACCCAGCAAG CCTCGCCCAG
AAGGCCCACG ACGCCGAAGG CGTATTCCGC AGGACGGGCA TCACGTTCGC CGTGTACGGC
GACGCGCAGG CCGCCGAGCG GCTGATTCCG TTCGACATCG TGCCGCGCAT CATCTCGGGC
GCGGAATGGA GCCGCCTGTC GCTCGGCATC GAGCAGCGCG TGATGGCGCT CAACGCATTC
CTCGACGATA TCTACCACCG CCAGGAAATC GTCCGCGCGG GCATCGTGCC GAAGCATCTG
ATCGCGCACA ACGAGGCGTT CATCCCGGAG ATGATCGATT TCCGGCCGCC CGGGAACGTT
TACACGCACA TCATCGGCGT CGACATCGTG CGCACCAGCG AGAACGAATT CTATGTGCTG
GAGGACAACG CGCGCACGCC GTCGGGCGTG TCGTACATGC TGGAAAACCG TGAAACGATG
ATGCAGCTCT TCCCGGAGCT GTTCCAGCAG GTCAAGGTGC GCCCGGTCGA GACCTATCCG
CAGATGCTGC GGCAATCGCT CGCGGCCGTA TGCCCGCCGG GTGGCAACGC CGACAACCCG
ACCATCGCCG TGCTCACGCC CGGCATCCAC AATTCCGCGT ACTACGAACA TTCGTTCCTC
GCCGACCAGA TGGGCGTGCA CCTCGTCGAG GGCAGCGACC TGCAGGTGGT CGACGGCCGC
GTCGCGATGC GCACGACCGA AGGCTTCCGG CAGATCGACG TGCTGTATCG CCGCGTCGAC
GACGCGTTCC TCGATCCGCT CACGTTCCGC CCCGACTCGG TGCTCGGCGT GGCCGGGATC
ATGGATGTCT ACCGCGCCGG CAACATCACG ATCGCGAACG CGCCGGGCAC CGGCATCGCC
GACGACAAGG CGATCTACTC GTACATGCCG GAGATCGTCG AGTTCTACAC CGGCCGCAAG
GCGTTGCTGG AGAACGTGCC GACCTGGCGC TGCGGCGAGG CCGACAGCCT GAAATACGTG
CTCGACCATC TCGACGAACT GGTCGTGAAG GAAGTGCACG GCTCGGGCGG GTACGGGATG
CTGGTGGGGC CGTGCGCGTC GAAGGCCGAA CTCGAGGCGT TCGCCGCGAA GCTGCGCGCG
CGACCCGCGA ACTACATCGC GCAACCCACG CTGGCGTTGT CCACGACGCC GATCCTGACC
GAAGCCGGCC TCGCGCCGCG CCACGTCGAC CTGCGGCCGT TCGTGCTGGT GTCGGACCGG
ATCCGCATCA CGCCGGGCGG GCTCACGCGC GTCGCGCTGC AGGAAGGATC GCTTGTCGTC
AACTCGAGCC AGGGCGGCGG CACCAAGGAC ACCTGGGTGC TGGCCGACTG A
 
Protein sequence
MENNSMKPFD EMLQSGDMVR PPYARLKQWL DTQNPASLAQ KAHDAEGVFR RTGITFAVYG 
DAQAAERLIP FDIVPRIISG AEWSRLSLGI EQRVMALNAF LDDIYHRQEI VRAGIVPKHL
IAHNEAFIPE MIDFRPPGNV YTHIIGVDIV RTSENEFYVL EDNARTPSGV SYMLENRETM
MQLFPELFQQ VKVRPVETYP QMLRQSLAAV CPPGGNADNP TIAVLTPGIH NSAYYEHSFL
ADQMGVHLVE GSDLQVVDGR VAMRTTEGFR QIDVLYRRVD DAFLDPLTFR PDSVLGVAGI
MDVYRAGNIT IANAPGTGIA DDKAIYSYMP EIVEFYTGRK ALLENVPTWR CGEADSLKYV
LDHLDELVVK EVHGSGGYGM LVGPCASKAE LEAFAAKLRA RPANYIAQPT LALSTTPILT
EAGLAPRHVD LRPFVLVSDR IRITPGGLTR VALQEGSLVV NSSQGGGTKD TWVLAD