Gene Bamb_3513 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_3513 
Symbol 
ID4312409 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp323325 
End bp324596 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content64% 
IMG OID638151355 
ProductN-glycosyltransferase 
Protein accessionYP_775401 
Protein GI115358263 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1215] Glycosyltransferases, probably involved in cell wall biogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.604039 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTCCC ACAGCATCAT CCAGCGCTTG CAGGACTTCG TCTTCTACTA TCCGTTCTTC 
ATGTCGTATC TGTGGATGAT CGGCGGCGTC GTTCACTACT TCCTGCTCGA GGAGGGCCGC
GAGCTGTCGA TGCGCACGAT CGCGTCGAGC GGCATCCCGA AGATCTCGAT CGTCGTGCCG
TGCTTCAACG AAGCGGCGAA CGCGCGCAGC GTGATCCGGC ATCTGAACGC GATGGACTAC
CCGAACTACG ACATCATCGC GGTCAACGAC GGCAGCCAGG ACCGCACGGG CGAGATCCTC
AACGAGCTGG CCGTCGAGAT CCCGCGGCTG CTCGTGATCC ATCACGCGCG CAACGAGGGC
AAGGCGGTCG GGCTCACGAC CGCGGCCGCG GTATCGAACG CCGAATACCT GCTCTGCATC
GACGGCGACG CGCTGCTCGC GCACGACGCG ATCGGCTGGA TGCTCGAGCA TTTCCTGACC
GATCCGGGTG TCGGCGCGGT GACCGGCAAC CCGCGCATCC GCACGCGCAC GTCGCTGCTC
GGGCGCATGC AGGTCGGCGA ATTCTCGTCG ATCGTCGGGC TGATCAAGCG CACGCAGCAG
GTGTACGGCC GCATCTTCAC GGTGTCGGGC GTGATCACGA TGTTCCGCAA GACCGCGCTC
GCCGATGTCG GCTACTGGAG CTCGGACATG CTGACCGAGG ACATCGACAT CAGCTGGAAG
CTGCAATGCC GCGACTGGCG CGTCGTGTAC GAGCCGCACG CGCTCAGCTG GATCCTGATG
CCCGAGACGG TCCGGGGGCT CTACCGGCAG CGGCTGCGCT GGGCGAAGGG AGGCATCCAG
GTGCTGATGA AGTACGCGGG CACGCTCGCG CGGCCGACGC AGATGATGAT GTGGCCGCTG
TTCATCGAGT ACCTGATCGG CATCGCGTGG GCGTACTCGA TGTCGTTCAT CCTGCTGCTC
GCGCTGATCG ACGTGGTCTA CCCGCTTCCG CCGAGCTGGC ATGTGTCCGT GGTGCCGCAC
TGGCACGGGA TGCTGCTGGT GGCGACCTGC ATCCTGCAGC TGATTATCGG CAGCATGATC
GATCGTCGTT ACGACGAAAA ACTCCTGATG TACTTCCTTG ACACCATCTG GTACCCCGTC
GCGTTCTGGT TGATCAGCAT GATCACCACC GTCGTCGCCC TGCCCGCCGT CGTATTGCGG
GGCCGCGGCA AGCGCGCCGT TTGGGTCAGT CCCGACCGAG GCATTCAACA TGAAGAACGC
GCCGATTATT GA
 
Protein sequence
MNSHSIIQRL QDFVFYYPFF MSYLWMIGGV VHYFLLEEGR ELSMRTIASS GIPKISIVVP 
CFNEAANARS VIRHLNAMDY PNYDIIAVND GSQDRTGEIL NELAVEIPRL LVIHHARNEG
KAVGLTTAAA VSNAEYLLCI DGDALLAHDA IGWMLEHFLT DPGVGAVTGN PRIRTRTSLL
GRMQVGEFSS IVGLIKRTQQ VYGRIFTVSG VITMFRKTAL ADVGYWSSDM LTEDIDISWK
LQCRDWRVVY EPHALSWILM PETVRGLYRQ RLRWAKGGIQ VLMKYAGTLA RPTQMMMWPL
FIEYLIGIAW AYSMSFILLL ALIDVVYPLP PSWHVSVVPH WHGMLLVATC ILQLIIGSMI
DRRYDEKLLM YFLDTIWYPV AFWLISMITT VVALPAVVLR GRGKRAVWVS PDRGIQHEER
ADY