| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3493 |
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| Symbol | |
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| ID | 4312389 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 299168 |
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| End bp | 302707 |
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| Gene Length | 3540 bp |
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| Protein Length | 1179 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 638151335 |
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| Product | ABC transporter related |
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| Protein accession | YP_775381 |
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| Protein GI | 115358243 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | [TIGR02857] thiol reductant ABC exporter, CydD subunit
[TIGR02868] thiol reductant ABC exporter, CydC subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTATTTCG ACCGACGACT ATGGGCCATG ATGGCGGGAC TGCGCTGGCG GGTGGCCGCG
GCCGTTGCGC TTGGGCTGCT CGCGATGGGT GTCGGCATCC TCCGTTTCGT GTTTCTCGGC
CGCGTGCTGG CGCTGGTCTT TTCCGGCGCA CCGGCGCGCA CCATCGGTGA AGCCGTCGTT
GCAACGTCGG CCTGCGTGCT GCTGCGTGCG TGGCTCGATC ATCGCCGCAC GGTGCTCGCG
CAGCACACGG CCGGGCGCGT GCAGGCCACG CTGCGCGCGC GCCTGTTCGA CCGGATCGCC
GCGCTCGGCC CCGCATGGTT CAGCGGCGAA CGCACGGGCG GCGTGATGCT GGCCGTCGTC
GACGGCGTCG AGCAACTGCA GACCTTCTTC GGCGTCTACC TGCCTCAGCT CGTAATTGCC
GCGTGCGCGC CGGTGATGAT CTTCGCGGTG CTCGCGTGGT GGGACGTGCC GACGGCCGCG
ATCCTGCTGG TCGCGGCGCT CGTCACGCTC GCGCTGCCGC AGCTCGTGCA TCGCGCCGAC
CGGCGCGCGG CGCTCGCACG CTCGGCCGCC TTCAAGGCAT TCGGCGAGGA GTTTCTCGAC
GCGGTGCAGG GCTTGCCGAC GCTGAAGGCG TTCGGGCAGG GCACCGCGTT CGGCGCGAAG
CTGGCCGCGA AGGCGCGCGC GCTGTCCGAC AGCACGTTCT GGGTGCTCGC GCTCGGCCTG
CTGACGCGGC TCTTCACCGA TCTCGGCACT GGCCTCGGCG CGGCCGCGGC GATCGCGGTC
GGTGCATGGC GCGTGCGGCA CGGCGACATG AGCCTCGAGG CGCTGCTGAT CGTGCTGATG
GCCGGCAGCG AAATCTTCCG GCCGCTGCGC GACCTGCGTG CCGTACTGCA CCAGGGGATG
ATCGGCCAGT CGGCGGCGAA TGCGATCCAC GCGCTGCTCG ACGCGGGCAG CCGCGCGCCG
GCCGCCGACG CGCCGCGCAT GACGGACCTG CGCGCGGAGA TCGCGTTCGA CGGCGTCAGC
TTCGCGTATC CGGGGCGTCG CGCGGACGCG CATGCGGCGC TGAGCTTCTC GGTTCGCGAA
GGCGAGACGG TGGCGATCGT CGGGCCGAGC GGCGCGGGCA AGTCGACCAT CGTGCGCCTG
CTGCTGCGCC AGCACGACGT GCAGGGCGGG GCCGTCCGCA TCGGGGGCCA CGATGTGCGT
ACGCTCGACG CCGACCAGGT GCGCGAGATG ATCGCGGTGG TCGCGCAGGA TGCGACGCTG
TTCGACGGCA GCGTCGCCGA CAACCTGCGG CTCGGCCGCC CGGACGCGAG CGACGCGGAC
ATGATCGCGG CCGCGCGCGC CGCCAACGCG CATGATTTCA TCTCGGCGCT GCCCGACGGC
TACGCGACGC GCATCGGCGA GCGCGGGCTC ATGTTGTCGG GCGGCCAGCG CCAGCGCCTC
GCGATTGCCC GGGCGCTGCT GCGCGATGCG CCGATCCTGC TGCTCGACGA GGCACTGTCG
TCGGTCGATG CGGAAAACGA AGCGCTGATT CAGCAGGCGC TCGACCGGCT CACGCGCGGG
CGGACGACGC TCGTGCTCGC GCACCGCCTG TCCAGCGTGA TCGGCGCCGA CCGCATCCTG
GTGCTCGACC AGGGGCAGGT GGTCGACGAG GGCACGCACG CGGCGCTGAT CGCGCGCGAC
GGCCCGTATC GCCGGCTGAT GGGGCCGCAA CTGGAAGCGG TTGCCGAATC CGTCGGCGTG
GCGACGACGG CCGGTGCGAC CGCGCGCGCG TCGTCGGGCC CGCAGGTGCG GCCGCTGAAC
GACGATGCCG GGACGATCGG CTGGCCGGAA ACCTTGCAGA CGCTGCTGCG GTTCGTGCGT
CCGTGGCAGG GCAAGGTCGT GCTGACCGTG CTGTTCGGCA TTGGTCGCGT GCTCGCGTTC
ATCGGCGTCG GCGTGATCGG CGCGATGGTG GTCGGCGCGG TGTCGGCCGG CCACGCGAGC
CCTGTGCTCG TCGTCGCGCT GCTCGTAATC GCGCCGGTGG CGGCCGTGCT GCATTGGCTT
GAATCGTGGC TCGCGCACGA CATGGCGTAC CGGCTGCTCG CGGAAATGCG CATCGCGCTG
TTCGCGACGC TCGAACGCCT CGCACCGGCC GGGCTGCTGC ATCGCCGTTC GGGCGATCTC
GTCTCGCTCG CGACGCAGGA TGTCGAGACC GTCGAATACT TCTACGCGCA CACGCTGGCG
CCCGCGTTCG TCGCGGTGCT CGTGCCGGCA GCCGTGCTGG TGCTGCTGGC GTCGGTCGCG
TGGCCGCTCG CGCTCGTGCT GCTGCCGTTC CTGTTGTGGG CCGGGCTGGC GCCCGTGCTG
GCGCGGCGCG ACGTCGACCG GCTCGGCACC GGCGCGCGCG AAGCGCTCGG CCAGCTCGGC
GCGCACGTGA CCGAAACGAT CCAGGGGCTG GCGGAGCTCA CCGCGTTCCA GGCGATCGCG
CGCCGGCGCG CGGCGTTCGT GGCCGAGGTC GATGCGTACC GCAAGCAGCG CGCGAAGCTG
CTCGACGACC TGTCGAAGCA AAGCGCCGCG CTGGAAATCG CGAGCTGGCT CGGCGGCCTG
ACCGTCGCGG CGCTTGGCGC GCTGCTGTGT GCGCGTGGCT GGTTTCCGCG CGAGTCGTTG
CCGCTGCTGG TGCTGGTTGC CGTGGCCGCG TTCATGCCGG TTGCCGAAAT CGGCCAGGTT
GCGCGCCAGC TAGCCGACAC GATCGCGTCG ACGCGCCGGT TGCGCGCGCT GGAGAAGGAG
CCCATGACCG TGACGGACGG CACGCACGCG ATGCCCGGCA ATCCGGCGGT GCGTTTCGAG
GCAGTGTCGT TCACGTATCC GGGCCGCGGC GTGCCAGCCA TCGACCGCGT GAGCTTCGAG
GTGCCGCCCG GCAGCACGGT TGCGCTGGTC GGCGCGTCGG GCGCCGGCAA GTCGACGGTC
GCGAGCCTGC TGCTGCGCTT CTGGGATCCG CAGCAGGGCC GCGTGACGCT TGGCGGCGTC
GACTTGCGCG ACCTGCGGCT CGACGACCTG CGCCAGCACA TCGCGCTGGT TGCGCAGGAT
ACCTACCTGT TCAACGACAC GCTCGAAGCG AACATCCGGC TCGCCGCGAA CGATGCGTCC
GACGCGGACG TGCGGCGTGC GATCGATCAT GCGGCGCTCG GCGAATTCGT CGCACGGCTG
CCGGACGGGC TCGCGACGCG TGTCGGCGAG CGCGGCGTGC AGCTGTCGGG CGGCCAGCGC
CAGCGTGTCG CGATCGCGCG CGCGTTCCTG AAGGATGCGC CCGTGCTGAT CCTCGACGAG
GCAACGTCCC ATCTGGACAC GATCAGCGAG CAGCAGATTC GTGCGGCGCT GGAAGACCTG
ATGACGCAGC GCACGTCGAT CATCATCGCG CACCGGCTGT CGACCGTGCG CAATGCCGAC
CTGATCCTCG TGATCGAGCA GGGCAGCGTG ATCGAGGCCG GACGGCATGC GGAACTGATG
GCGCGGCAGG GTGCGTATGC GCGGCTCGTG TCGCATCAGG CGAGCGGAGT GGCGGCGTGA
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| Protein sequence | MYFDRRLWAM MAGLRWRVAA AVALGLLAMG VGILRFVFLG RVLALVFSGA PARTIGEAVV
ATSACVLLRA WLDHRRTVLA QHTAGRVQAT LRARLFDRIA ALGPAWFSGE RTGGVMLAVV
DGVEQLQTFF GVYLPQLVIA ACAPVMIFAV LAWWDVPTAA ILLVAALVTL ALPQLVHRAD
RRAALARSAA FKAFGEEFLD AVQGLPTLKA FGQGTAFGAK LAAKARALSD STFWVLALGL
LTRLFTDLGT GLGAAAAIAV GAWRVRHGDM SLEALLIVLM AGSEIFRPLR DLRAVLHQGM
IGQSAANAIH ALLDAGSRAP AADAPRMTDL RAEIAFDGVS FAYPGRRADA HAALSFSVRE
GETVAIVGPS GAGKSTIVRL LLRQHDVQGG AVRIGGHDVR TLDADQVREM IAVVAQDATL
FDGSVADNLR LGRPDASDAD MIAAARAANA HDFISALPDG YATRIGERGL MLSGGQRQRL
AIARALLRDA PILLLDEALS SVDAENEALI QQALDRLTRG RTTLVLAHRL SSVIGADRIL
VLDQGQVVDE GTHAALIARD GPYRRLMGPQ LEAVAESVGV ATTAGATARA SSGPQVRPLN
DDAGTIGWPE TLQTLLRFVR PWQGKVVLTV LFGIGRVLAF IGVGVIGAMV VGAVSAGHAS
PVLVVALLVI APVAAVLHWL ESWLAHDMAY RLLAEMRIAL FATLERLAPA GLLHRRSGDL
VSLATQDVET VEYFYAHTLA PAFVAVLVPA AVLVLLASVA WPLALVLLPF LLWAGLAPVL
ARRDVDRLGT GAREALGQLG AHVTETIQGL AELTAFQAIA RRRAAFVAEV DAYRKQRAKL
LDDLSKQSAA LEIASWLGGL TVAALGALLC ARGWFPRESL PLLVLVAVAA FMPVAEIGQV
ARQLADTIAS TRRLRALEKE PMTVTDGTHA MPGNPAVRFE AVSFTYPGRG VPAIDRVSFE
VPPGSTVALV GASGAGKSTV ASLLLRFWDP QQGRVTLGGV DLRDLRLDDL RQHIALVAQD
TYLFNDTLEA NIRLAANDAS DADVRRAIDH AALGEFVARL PDGLATRVGE RGVQLSGGQR
QRVAIARAFL KDAPVLILDE ATSHLDTISE QQIRAALEDL MTQRTSIIIA HRLSTVRNAD
LILVIEQGSV IEAGRHAELM ARQGAYARLV SHQASGVAA
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