Gene Bamb_3489 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_3489 
Symbol 
ID4312385 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp295318 
End bp296112 
Gene Length795 bp 
Protein Length264 aa 
Translation table11 
GC content69% 
IMG OID638151331 
Productenoyl-CoA hydratase 
Protein accessionYP_775377 
Protein GI115358239 
COG category[I] Lipid transport and metabolism 
COG ID[COG1024] Enoyl-CoA hydratase/carnithine racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.168411 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACCCG ATCAAGAGAC TGCCGAGCCG ATCCTGTTGC GCGACGCGCA CGACGGCGTC 
GTCACGCTGC GGCTGAACCG GCCGCCACAG TTCAACGCGT TGTCGGAGGC GATGCTCGCG
AGCCTGCACG ACGCGTTCGA ATCGCTGGCC GCCGATCCGC ACGTGCGCTG CGTCGTGCTC
GCCGCGCAAG GCAAGGCGTT CTGCGCGGGC CACGACCTGC GGCAGATGCG CGGCAAGCCC
GAACTCGATT ACTACCGCAC GCTGTTCGCG CAATGCAGCC GCGTGATGCT CGCGATGCGC
GCATTGCCGG TGCCGGTGAT CGCGCGCGTG CAGGGGATCG CAACGGCGGC CGGCTGCCAG
CTCGTCGCCG CGTGCGACCT TGCGATTGCG GCCGACACCG CGCGCTTTGC CGTGTCGGGC
ATCAACGTCG GGTTGTTCTG TTCGACGCCG GCCGTCGCGT TGAGCCGCAA CGTCACCGCG
AAGCGGGCGT TCGACATGCT CGTGACCGGG CGTTTCGTCG ACGCGGCGAC GGCCGCCGCG
TGGGGGCTCG TCAACGAGTC CGTGCCCGAG GATGCGCTCG ACGCGGCCGT CGCGCGCAAG
GTCGCGGAGA TCGTCGCGAA GAGCCCGGCG GCGGTGCGCT ACGGCAAGCA GATGTTCTAC
CGGCAGCGCG AGTTGCCGCT CGACGAAGCC TATGCGTATG CGGGCGACGT GATGGCGCGC
AACATGATGG AAGAGGACGC CGGAGAAGGG ATCGATGCGT TCCTGGAGAA GCGCAAGCCG
ACGTGGCGGT CGTAG
 
Protein sequence
MEPDQETAEP ILLRDAHDGV VTLRLNRPPQ FNALSEAMLA SLHDAFESLA ADPHVRCVVL 
AAQGKAFCAG HDLRQMRGKP ELDYYRTLFA QCSRVMLAMR ALPVPVIARV QGIATAAGCQ
LVAACDLAIA ADTARFAVSG INVGLFCSTP AVALSRNVTA KRAFDMLVTG RFVDAATAAA
WGLVNESVPE DALDAAVARK VAEIVAKSPA AVRYGKQMFY RQRELPLDEA YAYAGDVMAR
NMMEEDAGEG IDAFLEKRKP TWRS