| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3488 |
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| Symbol | |
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| ID | 4312384 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 293790 |
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| End bp | 295199 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638151330 |
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| Product | major facilitator transporter |
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| Protein accession | YP_775376 |
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| Protein GI | 115358238 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.36718 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGATT GCAATCCCGT TTCCGTTCCC GTATCCATGA CGGCAGCGAG CCGCCCGACG
GCGCGCGAGC AGCGCTTCAC GCTGGCGCTT GTCGCGATCG GAATGTTCAT GGCGGTACTC
GATACGACGA TCGTCAACGT CGCGCTGCCC GCGATGCGCA CGAATCTCGG CGCGACGGTC
GCGGAACTCG CGTGGATCGT CGACGCGTAT ACGCTCAGCT TCGCGGCGCT GATCCTCGCG
GGCGGCGCGC TGTCCGACCG GTTCGGCGCG AAGCACGTGT ATCTCGCGGG GCTGGCGTTG
TTCGTCGGCG CATCGGCGGC GTGCGGCGTC GCGTCGTCCG TGGCCATCCT CGTGGCCGCG
CGTTTCGTGC AGGGCATCGG CGCCGCACTC TTTTTGCCCG CGTCGCTCGC AGTCGTGCGC
AGCACTTTCG ACGTGCCTGC CGAGCGGGCG CGCGCGATTG CGGTCTGGGC GGGCATCGCG
TCGGTCGCGG TGGCCGTGGG ACCGGTGCTG GGCGGCATCC TGGTGGATGA TTTCGGCTGG
CGCAGCGCTT TCCTGATCAA TGTGCCGACC GGCGCGCTCG CCTTCGCCGG GGCGGCGGTG
CTCGTCCGGG CGTCGGTCGC GCGGCATGCG CGCCACTTCG ATTGGGCCGG CCAGTGCATC
GGTGCGACGG CACTCGGCGC ACTGTGTTTT GCAGTGATCG AATTGCCGAC GCGCGGCCCT
GGCGCCGCGG AAGTCCGGTG TGCACTGCTG GTCGCCGGGC TCGCTGCCGT CGTGCTGATC
GTCGTCGAGC GGCGCGCCCG CAATCCGATG GTTCCGCTGG TCTGGTTTCG CAATCGTATA
TTCGTTGCGA TGAACGTGAT GGGCAGTCTC GTCTATGTCG GCTACTTCGG TCTGCTGTTC
GTCCTGAGCC TGTACCTGCA CGGGCGCTTC GGCATGAGTG CGCGGCAGAC GGGGCTGACG
TTGTTGCCGT TTGCGCTGAG TTTGTCGCTT GGCAATCTGT TGTCGGGGAA ATGGCAGGGC
CGCGTCCACC CGGTCCGGCT GATGGCAAAC GGCCTCGGGA TGGCGGCGCT GGCCATTCCG
GCGCTCGCGG TCGCGCTCAC GCTGCGCGCG CCGTGGCCGG TGGTCTGGGC GGCCATGGCC
GCCTTCGGCA CCGGGACCGC GTTGTCCGTG GCGCCGATGA TCGCGACCGT GCTCGAACAG
GTGCCTGCGG ATGCGGCGGG CGTGGCGTCG GGATTCCTCA ATGCGGCGAG ACAGGCAGGG
AGCCTGCTCG GCGTGGCCAT CGCAGGCGCC GCGACGATAC TGTTGCCGAA TCTGACCGAC
GCGCTGTGGG CGATCGCGGC GGTCGGCTGT GTCGCCTATG CGACGGCCGC CTTTACCGCG
CGGACGGCGG GCACCGCGAA AGGCACGTGA
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| Protein sequence | MTDCNPVSVP VSMTAASRPT AREQRFTLAL VAIGMFMAVL DTTIVNVALP AMRTNLGATV
AELAWIVDAY TLSFAALILA GGALSDRFGA KHVYLAGLAL FVGASAACGV ASSVAILVAA
RFVQGIGAAL FLPASLAVVR STFDVPAERA RAIAVWAGIA SVAVAVGPVL GGILVDDFGW
RSAFLINVPT GALAFAGAAV LVRASVARHA RHFDWAGQCI GATALGALCF AVIELPTRGP
GAAEVRCALL VAGLAAVVLI VVERRARNPM VPLVWFRNRI FVAMNVMGSL VYVGYFGLLF
VLSLYLHGRF GMSARQTGLT LLPFALSLSL GNLLSGKWQG RVHPVRLMAN GLGMAALAIP
ALAVALTLRA PWPVVWAAMA AFGTGTALSV APMIATVLEQ VPADAAGVAS GFLNAARQAG
SLLGVAIAGA ATILLPNLTD ALWAIAAVGC VAYATAAFTA RTAGTAKGT
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