| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3486 |
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| Symbol | |
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| ID | 4312382 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 291542 |
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| End bp | 292756 |
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| Gene Length | 1215 bp |
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| Protein Length | 404 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638151328 |
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| Product | OmpA/MotB domain-containing protein |
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| Protein accession | YP_775374 |
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| Protein GI | 115358236 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[S] Function unknown |
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| COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins
[COG3455] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03349] type IV / VI secretion system protein, DotU family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0632352 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.779995 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTCTTT CGACAACCGA TCCGCGGGGC CACGCAGGCG CCGTGGCGTC GCCGCCTGTT
GCCGCGCGGC TCACGGCCGC GGAGCAGGCG ATTAACCCGC TGCTCGAAGC GTCGCGCGTT
CTGTTGCAGG CATTGGCCGA TACGCCCGAC ATGCTCGATG CCGACGCTAT TACACGGTGG
CGTCGATGGC TGGGGCAGGA AGTTCGTCTC TTCACCCGGA TCTCCGGTGA ACTCCAGCTC
AGCCCCGAGC ATGTCCGGCG CGCAAGCTAT TGTCTGTGCT CCGCGCTCGA CGAGGCGGCG
ATGCAGACGT CGTGGGGAAA GGGCGAAACA ACCGGCGTCG AATGGCAGGA CAACAGTCTG
GCGAGTGTGT CGGGGCATGA TCGTCAGGGC GGCGACCGTG TTTTCCAGCT GATCGACGAG
GCCATGCGCG ATCCGCGCGA GAACCTCGAT CTGATTGAGT TGTACCAAAA CGTACTCGAT
CTCGGGTTTC GTGGGCGGTA CCGATTTGAA GCAGGCGGTC ACAAGCGCTT GCAGGTGATT
CGCGAACACG TGCACGACGC GGTTATGACG GGTGGGCTGA ACGTGAATCG CGTCAGCGAG
CCGCCGAAAC GTACGCGACA GACGGTCGAT CCGTGGGTAC GTCCGGTGGC GGTGCGTCGA
TCGCGAGCGA GGTTCGTAGG AGGTCTCGCT GTTGCGTTAT TGCTGGGGGC CGGGGGCTAC
GCCGCGGCGG ACCGTTGGGT GCGCACGAAA GAGACCCGCC GGGCTTTGCC GCTTGATGCG
CTCGCTCGAA ACCTGGAACA ACGGCTTCGC GACGAGGTTG CCGCGGGGAA TGTCGAACTG
ATTCGCGCTC CCGGGAGCGA TGCGTTGACG CTGCGGTTTG GCGGCCTGTT TGCGCCTGGG
GATGCGGCGG TGGCGCCGTG GGGGGCTTCT GTCGTGGCTT CGGCCGGGCG GGAAATCGCA
GTGCTGACCG GCAGTGCAAC CGTGCATGTG GCGGGCTACG CGGACAGCAC GTCGGCCCGT
TCGACACGCC AAGCGTCTAA CCAGGCGCTT TCCGAAGCGC GGGCCCGGCA CGTGGCCCAG
ATTCTCGTTT CGGCTGGCGT ATCGGCGCCG CGTATCAGTG TCGAGGGAAA TGGCGAGGCC
GATTCGCTGG CGGACAACGG AACCGCGGCG GGAAGGGCGA GAAATCGCCG CGTCGAAGTG
ACCATCACGG ATTGA
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| Protein sequence | MALSTTDPRG HAGAVASPPV AARLTAAEQA INPLLEASRV LLQALADTPD MLDADAITRW
RRWLGQEVRL FTRISGELQL SPEHVRRASY CLCSALDEAA MQTSWGKGET TGVEWQDNSL
ASVSGHDRQG GDRVFQLIDE AMRDPRENLD LIELYQNVLD LGFRGRYRFE AGGHKRLQVI
REHVHDAVMT GGLNVNRVSE PPKRTRQTVD PWVRPVAVRR SRARFVGGLA VALLLGAGGY
AAADRWVRTK ETRRALPLDA LARNLEQRLR DEVAAGNVEL IRAPGSDALT LRFGGLFAPG
DAAVAPWGAS VVASAGREIA VLTGSATVHV AGYADSTSAR STRQASNQAL SEARARHVAQ
ILVSAGVSAP RISVEGNGEA DSLADNGTAA GRARNRRVEV TITD
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