| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3481 |
|---|
| Symbol | |
|---|
| ID | 4312377 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008391 |
|---|
| Strand | + |
|---|
| Start bp | 282817 |
|---|
| End bp | 284832 |
|---|
| Gene Length | 2016 bp |
|---|
| Protein Length | 671 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 638151323 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_775369 |
|---|
| Protein GI | 115358231 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.278924 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGAGCCC GTAATGCATC TCATGCCGCG ACCTTGAACG ACGTGGCATC CGTTGTGGCG
GAGTATTCGC CGAAAGCGAA GGTCGAAACC TTTGCTTTTT CACCCTACGG GTTCAACTCC
CGGGCATCGA CAACAGACGG CCTGTTGCGC GCCGCCTGGT CACTGGGGCC TCAACCTGCG
GCCATGCTGG TCATCGATGA TCCGGCAAGC GTGGCTGCAG AGATCGGCGC TCGAACCATC
GAGCTTCATG ACAGCTTTAT GGCCGTGGCC GAGCGATCGA GAAAACTGAG CGTCTCTACC
GCAATTCTTA GCCTTCAGGG TGCGGTCGCC GATCGGGCGG AGATGAATGA GATTGTGGCG
GGCGACGAAC TTGAGCAAGA CGGACATTAC GTTCCGGATG GGCTTGGGCG TATCACTTAC
GTGGCCAATC CACCGAAACT TCCCGATACC ACGGTGGCGG ATCTACGCAA AATTTCATCG
AAATCGTGGG CGAAGTATGC GCTCGACTAC GACGAAGATG CGCGTGGTAA ATGGCAGGGT
GAGTTCAACC AAGAGTATGG TCGGTTCCGC GACGAGACGC TGCATCCGTT GGCAGCGTCT
CACGTTCAGT GGATGACAAG CAACCAGATG CGGAACTATC TGGAGTGCAC ACACGACGAC
ACTTCGGCCG AAGTTGGGCT CGTCTACGCT CGCATTCTCA CCGCGTGCAT CCAAGGCACG
GAGCAATTCA AGCCTTGCGC GCAATTGTAT GCGCGCTGGC TTAACGGCGT GATTTCCGAT
GACAAGAATA TCGTGTTGCG CGGCATCGTT CTGAATCTTG AAATCAACAA GAAGAAATTT
TCGGAAAGCC TCAAGCCTGA GGTCACGTGG CAGGCTGTCG GCTGGGACGG CCTGATGCTG
GCGTTCAACA ATTCCATCGA CGGCGTGGCC AAGCAGGCGC CGGAGGTGCT GGGTAAATTG
CTGGCATCGC TCGGTGGGTC GATCACCCAG GTGTTGCAAA GTGCAGCGGA TGGGCCGGTT
CGTCATGCCC TGGTCGCGTG CGGCGTGGTT AGCGGCCGAG CGGTCGTGCC GGTCGAGTTG
ACTGGCTCGT ACAAGACATA TCGCACGTCG CTTATCCGCC AACTCTTGCA ATCATCGGGC
ATCAAGAATA TTGGCAAAAA TGCTCTCCAG AGAGAGGTGT CGCTCGCCTT GCGCCGTCTC
CAGATTCGGG GGGAGCCGAT GAGTACGGTT GTCTCGTCGA AGTTCCTGGT GATGATCGAC
GAGGAGTCGA TCAAAGGCAT GCCAAAAGGA CTGAGCAAGA CCGAACAGGC CAAATGGCTT
GCGAACTCGA TTCGTTCCGC CGAGGAGATC GAGAGACTGA ATCTGTCGGT TTGGCGGGAG
CGGATCAATC TGTCGCAGAG GGTAGCAACC GCGGGTAAAG CGATACCGTT TCTCGGCAAC
ATGCTAGCGG GACTCTTTCA GTGGGCGGCA TATCAAAAGG TGTCGAAAGA TCTGGCGGGT
TCGATGAAAG GCGACATGCT GGAGAGTCAG TACAGGTTGG GTAGTGCAGT GATTGCGTTG
GGTTCCACGG TGGCCGACAC CATAGCGAGG GCTGCTGGCA GTTTGGCCGA GACGACTTTG
CTGAGAGGGC GGGCCGTGCT GTTGGAGGTG GTTGGGAGTC TGTTCGGGAT TGCATCGAAG
GCCGCGGGGA TCTTGGCCGC TGGAATTAAC GCATTTTGGG ACGGGAAGAA TGCCGTGGAA
GCCATTCAAC AGCGAAATTA TCCGTTGGCT GTAGCTCTAG GCGTGTCAGC CTTGTCGGGT
TTTGCTGCTG CGGCCCTACT GGTTGCGGGG TCAGTAATTG GAGCGATATT TGCGATTATC
GTTTTCATTG GATCAGGGGT AGTTGCTACA TTTCTGCAGG ATGACAAGAT TGATAAGTGG
TTGAAGCGTT GTTACTGGGG TGTCTTGGAG GCCAAGGACC GCTATCAAAA TGTAGATGCA
GAAATGAGCG ACTTGGTGGT CGCGACTGGT GGGTGA
|
|---|
| Protein sequence | MGARNASHAA TLNDVASVVA EYSPKAKVET FAFSPYGFNS RASTTDGLLR AAWSLGPQPA
AMLVIDDPAS VAAEIGARTI ELHDSFMAVA ERSRKLSVST AILSLQGAVA DRAEMNEIVA
GDELEQDGHY VPDGLGRITY VANPPKLPDT TVADLRKISS KSWAKYALDY DEDARGKWQG
EFNQEYGRFR DETLHPLAAS HVQWMTSNQM RNYLECTHDD TSAEVGLVYA RILTACIQGT
EQFKPCAQLY ARWLNGVISD DKNIVLRGIV LNLEINKKKF SESLKPEVTW QAVGWDGLML
AFNNSIDGVA KQAPEVLGKL LASLGGSITQ VLQSAADGPV RHALVACGVV SGRAVVPVEL
TGSYKTYRTS LIRQLLQSSG IKNIGKNALQ REVSLALRRL QIRGEPMSTV VSSKFLVMID
EESIKGMPKG LSKTEQAKWL ANSIRSAEEI ERLNLSVWRE RINLSQRVAT AGKAIPFLGN
MLAGLFQWAA YQKVSKDLAG SMKGDMLESQ YRLGSAVIAL GSTVADTIAR AAGSLAETTL
LRGRAVLLEV VGSLFGIASK AAGILAAGIN AFWDGKNAVE AIQQRNYPLA VALGVSALSG
FAAAALLVAG SVIGAIFAII VFIGSGVVAT FLQDDKIDKW LKRCYWGVLE AKDRYQNVDA
EMSDLVVATG G
|
|---|
| |