| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3461 |
|---|
| Symbol | |
|---|
| ID | 4312196 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008391 |
|---|
| Strand | + |
|---|
| Start bp | 258378 |
|---|
| End bp | 258785 |
|---|
| Gene Length | 408 bp |
|---|
| Protein Length | 135 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 638151303 |
|---|
| Product | PilT domain-containing protein |
|---|
| Protein accession | YP_775349 |
|---|
| Protein GI | 115358211 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1487] Predicted nucleic acid-binding protein, contains PIN domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.999718 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTTTC TGCTGGATAC CCATGCGGTA ATCGCCATTC TGAAAGGCGA ACAGGCCATG
CTGGCCCGAT TGCGTAGACA TCAACCTGCG GATTTCGGAA TTCCCGCGAT CGTCGCGCAT
GAACTCTATT ACGGGGCGTA CAAGAGTCAG AGAGCGGCAG CGAATCTGGC ACGCGTCGAG
GGGCTTCAGT TCGAGGTCGT GTCGTTCGAT GCGGAAGATG CGCAGCATGC CGGTGAAATC
GGTGCGCAAC TGGCCGCGGT GGGAACACCG ATCGGGCCAT ACGATGCATT GATCGCAGGA
CAGGCGCGAG CGCGACGCCT GGTGCTTGTC ACGCACAACA CGCGCGAGTT TGAGCGGGTC
CCGGAACTGC AGGTCGAGGA TTGGCTCGCG GCGGCGCGCG AAAACTGA
|
|---|
| Protein sequence | MKFLLDTHAV IAILKGEQAM LARLRRHQPA DFGIPAIVAH ELYYGAYKSQ RAAANLARVE
GLQFEVVSFD AEDAQHAGEI GAQLAAVGTP IGPYDALIAG QARARRLVLV THNTREFERV
PELQVEDWLA AAREN
|
|---|
| |