Gene Bamb_3455 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_3455 
Symbol 
ID4312190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp251847 
End bp252911 
Gene Length1065 bp 
Protein Length354 aa 
Translation table11 
GC content70% 
IMG OID638151297 
ProductL-asparaginase II 
Protein accessionYP_775343 
Protein GI115358205 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4448] L-asparaginase II 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.282624 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACACCC AACGAGCAGC GGTCGTCACG TACCGCGGCA ATGCGATCGA GAACACGCAC 
GTCGCCGATG TGGCGGTGGT GGATGCCGGC GGCAAGCTGC TGTTCAGGCT CGGCGATCCG
TTCCGGATGA CGCTCGCGCG CTCGGCGGCG AAGCCGGCGC AGGCGCTGTC CGTGATCGAG
ACGGGCGCGC CGGAGCGGTT CGGTTTCGAC GACGCGGACA TCGCGCTGAT GTGCGCGTCG
CACAGCAGCG AGGAGCAGCA CATCGCGCGC ACGCGGGCGA TGCTGGCGAA GGTCGACGCG
CACGAGTCGG ATCTGCGCTG CGGCGGCCAT GCGCCGCTGT CGGACGCGGT GTACCGGTCG
TGGATCAAGC GCGACTACAC GCCGACCGGC GTGTGCAGCA ACTGCTCGGG CAAGCACGTC
GGGATGCTGG GCGGCGCGCG GGCGATCGGC GCCGCGATCG CCGACTACCA TCTGCCGGAG
CATCCGATGC AGGTGCGCGT GAAGCAGGTG GTCGCCAACG CGTGCGGGCT GCGCGACGAC
GAGGTCGACT GGGCGATCGA CGGCTGCAAC CTGCCGACGC CGGCGTTCCC GCTCGACCGC
CTCGCGCGTC TTTACGCGTC GCTGGCCGAC GGTGCGGATA CGGTGGAAGC ACGCGGTGCG
GCGACGACCG ATCGCGTGCG CGCGCTGGCG CGCATTCATC ATGCGATGAC GGCCCATCCG
GAGCTGGTCG CCGGCGAAGG GCGCTACTGC ACGGTGTTGA TGGAAGCGTT CGAAGGGCAG
GTCGTCGGCA AGCTCGGCGC GGATGCGTGC TACGGGATCG GCGTACGCGC ATCGGCGCGC
ACGCGGGAGC TCGGCGCCGA CGGTGCGCTC GGCATCTCGG TGAAGATCGA GGACGGCAAC
ATCGACGTGC TGTACATGAT GGTCAGCGAA CTGCTCGAAC GGTTGCGCAT CGGCACGGAC
GCGCAGCGCG CGCGGCTCGC CGCGTTCCAT CGGCCGCGGA TGCTGAACAC GCAAGGCGTC
GAGATCGGGC ACGCGACGTT CCCGTTCGAA TTGCAGGCTG CGTGA
 
Protein sequence
MDTQRAAVVT YRGNAIENTH VADVAVVDAG GKLLFRLGDP FRMTLARSAA KPAQALSVIE 
TGAPERFGFD DADIALMCAS HSSEEQHIAR TRAMLAKVDA HESDLRCGGH APLSDAVYRS
WIKRDYTPTG VCSNCSGKHV GMLGGARAIG AAIADYHLPE HPMQVRVKQV VANACGLRDD
EVDWAIDGCN LPTPAFPLDR LARLYASLAD GADTVEARGA ATTDRVRALA RIHHAMTAHP
ELVAGEGRYC TVLMEAFEGQ VVGKLGADAC YGIGVRASAR TRELGADGAL GISVKIEDGN
IDVLYMMVSE LLERLRIGTD AQRARLAAFH RPRMLNTQGV EIGHATFPFE LQAA