| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3449 |
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| Symbol | |
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| ID | 4312184 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 245985 |
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| End bp | 247058 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638151291 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_775337 |
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| Protein GI | 115358199 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.103484 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCAGCG ACCTCTCCCG CCCGCCCGGC GGCCTGCACG CGGCGTTCGA CGCCGGCCCC
ACGCCGCACG CCGACGCTCC CGCGATGGTC CTGCTGGTCG ACGACCAGAC GATCGTCGCG
GAAGCCATCC GCCGCGCGCT CGTCGACGAG GACGGCATCG ACTTCCACTA CTGCCCGCGC
TCGGACGACG CGCTGGCGAC CGCGCTCGAG ACGCGGCCGA CGGTGATCCT GCAGGATCTC
GTGATGCCCG GCACCGACGG GCTGACCCTC GTGAAGGCAT ACCGTGCGAA TCCGGCGATG
CGCGACGTGC CGATCATCGT GCTGTCGACG CAGGAAGAGC CGGTGGTGAA GAGCGCCGCG
TTCGCGGCCG GCGCGAACGA CTACCTCGTG AAACTGCCCG ACCGCATCGA GCTGGTCGCG
CGGATCCGCT ATCACTCGCG TTCGTACATG AGCCTGCTGC AGCGCGACGA GGCCTATCGC
GCGCTGCGGC AATCGCAGCA GCAACTGCTC GAGGCCAATC TCGAACTGCG GCGCCTCACG
CATTCGGACG GCCTGACCGG GCTGTCGAAC CGGCGCTATC TCGACGAATA TCTGGCGGCC
GAATGGCGGC GCGGCGCGCG CGAGCGCAGC GAGCTGTCAC TGCTGATGAT CGACGTCGAC
AACTTCAAGC TGTACAACGA CACGTACGGC CACGTATCGG GCGACAGCGT GCTCAAGCAG
GTCGCGTCGA CCATCGAGCG CTGTCTCGGG CAGTCCGGCG ATCTCGCCGC GCGCTTCGGC
GGCGAGGAGT TCGCGGTCGT GATGCCGGCC ACGTCGCCGG GCGCCGCGCG GCTGCTCGGC
GAGAAGATCC GCCTCGCGAT CGAAGGGCTG CGGCTCGAAC ACGCGCACTC GTCGACGGGC
CGCTACGTGA CGATCAGCAT CGGCGGCGCG AGCATCGTGC CGGCCGCCGG CGTGCCGACG
ACGTCGCTGA TCGAGGCGGC CGATCGCGCG CTGTATCGCG CGAAGCACGA CGGCAAGAAT
CGCGTCGAGA TCGATGCGCC GCCTGCGCGT CCGCCCGGCG GCGGTGTCGC TTGA
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| Protein sequence | MTSDLSRPPG GLHAAFDAGP TPHADAPAMV LLVDDQTIVA EAIRRALVDE DGIDFHYCPR
SDDALATALE TRPTVILQDL VMPGTDGLTL VKAYRANPAM RDVPIIVLST QEEPVVKSAA
FAAGANDYLV KLPDRIELVA RIRYHSRSYM SLLQRDEAYR ALRQSQQQLL EANLELRRLT
HSDGLTGLSN RRYLDEYLAA EWRRGARERS ELSLLMIDVD NFKLYNDTYG HVSGDSVLKQ
VASTIERCLG QSGDLAARFG GEEFAVVMPA TSPGAARLLG EKIRLAIEGL RLEHAHSSTG
RYVTISIGGA SIVPAAGVPT TSLIEAADRA LYRAKHDGKN RVEIDAPPAR PPGGGVA
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