| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3446 |
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| Symbol | |
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| ID | 4312181 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 242450 |
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| End bp | 243250 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638151288 |
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| Product | haloacid dehalogenase, type II |
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| Protein accession | YP_775334 |
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| Protein GI | 115358196 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01428] 2-haloalkanoic acid dehalogenase, type II
[TIGR01493] Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.301788 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGATCG AACCGGCGCC GCGCAATCCG GCGGCACGGA GATGCGCCCT CTCATCGATC
GACCTTCACT GGATCACCAT GACGAACCCT GCCGACATCA AGGCGCTCGT TTTCGACGTG
TTCGGAACGA TCGTCGACTG GAGAAGCGGC GTCGCGCGCG AAGCCGCGGC GTTCCTGGCG
CGCCATGCGG CGGATCTCGA CCCGTTCGAA TTCGCCGACG CGTGGCGCGC CGAATATTCA
CCGTCGATGG AGGAAATCCG CAGCGGCCGC CGCCGCTACG TGCGGCTCGA CGTGCTGCAT
CGCGAGAACC TCGTGCGCAC CCTCGACCGC TACGGCATCG ACGGCGCGCC CGATGACGAG
ATCGACGCGC TGAACCTCGC GTGGCACCGG CTCGATCCGT GGCCCGATTC GGTCGCGGCG
CTGCAGCGGC TGAAGCAGCG CTACGTGATC GCGCCGCTGT CGAACGGCAA CATCCGGCTG
ATGATCGACG TCGCGAAGCA CGGCGGCCTG CCGTGGGACG CGATTCTCGG CGCGGAAGTC
GCGCACGCGT ACAAGCCGTC GCCGAAGGTC TATACCGATG CGGTCGAGAT CCTCGGCGTC
GCGCCGGCCG AGGTGTGCCT GGTCGCCGCG CACAACGGCG ATCTCGCCGC CGCGCGGCAA
CTGGGGCTGG CGACCGCGTT CGTGCTGCGG CCGGCCGAAC ACGGGCCGAA CCAGACGACC
GACCTGCAAG CGGACGACGC GTGGGACTTC GACGTCAGGG ACCTGAACGA ACTCGCGGAC
CGGCTCGGGT GCCCTGGTTG A
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| Protein sequence | MSIEPAPRNP AARRCALSSI DLHWITMTNP ADIKALVFDV FGTIVDWRSG VAREAAAFLA
RHAADLDPFE FADAWRAEYS PSMEEIRSGR RRYVRLDVLH RENLVRTLDR YGIDGAPDDE
IDALNLAWHR LDPWPDSVAA LQRLKQRYVI APLSNGNIRL MIDVAKHGGL PWDAILGAEV
AHAYKPSPKV YTDAVEILGV APAEVCLVAA HNGDLAAARQ LGLATAFVLR PAEHGPNQTT
DLQADDAWDF DVRDLNELAD RLGCPG
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