| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3443 |
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| Symbol | |
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| ID | 4312178 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 239570 |
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| End bp | 240889 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638151285 |
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| Product | major facilitator transporter |
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| Protein accession | YP_775331 |
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| Protein GI | 115358193 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0269111 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGACCC GATCCACCCT CGATGAGCAT GCAAGCGTCG CGACGCCGGC GCCCGCCCGC
ACCGCGCGGC ATTACCTGCT GGCCGGCTGG GCCAGCATGG CCGGCACGAC GATCGAGTGG
TACGACTTCT TCCTCTACGG CACCGCCGCC GCGCTGGTAT TCAACCGCAT CTTCTTTCCG
TCGCTGGACC CCGTCGTCGG CACGCTCGCC GCGTTCGGCA CGTTCGCGGT CGGCTTCATC
GGCCGGCCGA TGGGCGGCAT CGTGTTCGGC CACTTCGGCG ACCGCATCGG GCGCAAGTCG
ATGCTGATGA TCACGCTGCT GCTGATGGGC GTGCCGAGCA TGATCATCGG GCTGATCCCG
TCGTACGACA GCATCGGCTA CTGGGCCGCC GCGCTGCTGA TCGCAATGCG CTTCCTGCAG
GGGATGGCGG TCGGCGGCGA ATGGGGCGGC GCGGTGCTGA TGGCCGTCGA GCATGCGCCG
AAGGGCCGCA AGGGGCTGTT CGGCAGCCTG CCGCAGACGG GCGTCGGGCT CGGGCTGATC
CTGTCGTCGG TCGCGATGGC CGCGGTGGCC GCGCTGCCGG ACGCCGACAT GCTGTCGTGG
GGCTGGCGCG TGCCGTTCCT CGCGAGCATC GCACTGGTCG GCCTCGGCTG GTTCATCCGC
GCGAAGGTGC CGGAGTCGCC GGACTTCGAG AAGATCCAGC GCCAGGGCAA GGCCGAGAAG
TCGCCGGTGA CGGCCGCGCT GCGCCGCCAT CCGCGCGAAG TGCTGACGAT CGTCGGCGCG
CGCGCCGCCG AGAACACCTG GTTCTACATG GTCGTCACGT TCGCGCTCGC GTATGCGACG
CAGCAGCTGC ATCTGCCGAA GGCCGAGATG CTGCACGCGA TCACGGCCGG CGCGGCGCTG
TCGCTCGTCA CGATGCCGCT GTGCGGGCAT CTCAGCGACC GCATCGGCCA GCGCCGGATG
TTCGCGATCG GCCTCGTGCT GATGTGTGCG TTCGCCGCGC CGTTCTTCAT GATGCTCGGC
ACGCAGCAGA CGTCGACCGC ATGGTGGGCG ATCGTGCTCG GCCTCGGCGT CGTGTTCCCG
ATTCTTTATG CGCCGGAGGC GCTGCTGTTC GCGCAGCAGT TCCCGGCGGA AATCCGCTAC
AGCGGCATCT CGCTGTCGGT GCAGCTCGCC GGCGTGATCG GCGGCGGCTT CGCGCCGATG
ATCGCGACGT CGCTGCTGAA GGCCGGCGGC GGCCAGCCGC ACTACGTGAT CGCCTACCTC
GTCGGCTTCG GCGTGTTCGC CCTCGCGTGT ACCGCGCTGA TGCGTCCGGC ACGCGCGTGA
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| Protein sequence | MQTRSTLDEH ASVATPAPAR TARHYLLAGW ASMAGTTIEW YDFFLYGTAA ALVFNRIFFP
SLDPVVGTLA AFGTFAVGFI GRPMGGIVFG HFGDRIGRKS MLMITLLLMG VPSMIIGLIP
SYDSIGYWAA ALLIAMRFLQ GMAVGGEWGG AVLMAVEHAP KGRKGLFGSL PQTGVGLGLI
LSSVAMAAVA ALPDADMLSW GWRVPFLASI ALVGLGWFIR AKVPESPDFE KIQRQGKAEK
SPVTAALRRH PREVLTIVGA RAAENTWFYM VVTFALAYAT QQLHLPKAEM LHAITAGAAL
SLVTMPLCGH LSDRIGQRRM FAIGLVLMCA FAAPFFMMLG TQQTSTAWWA IVLGLGVVFP
ILYAPEALLF AQQFPAEIRY SGISLSVQLA GVIGGGFAPM IATSLLKAGG GQPHYVIAYL
VGFGVFALAC TALMRPARA
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