Gene Bamb_3439 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_3439 
Symbol 
ID4312174 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp235291 
End bp236052 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content63% 
IMG OID638151281 
Producthypothetical protein 
Protein accessionYP_775327 
Protein GI115358189 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.595275 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0623525 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCCA TTCGAACGAT AGTGGCCCTG TGCTCGGTCA TTTCCGTACT CGCGGCATGC 
GGCGGCGGCG ACGACGTCGG CACCGAACTC GGCATCTCCA AACCGCAGGC ACGTTTCATC
AACGCAGTGC CGGCCGGCCC GAATCTCGAC TACTACCTGA ACGCGAAAGT CGACGCGTCA
GGCATCGCCT ACAAGGGCGT GACCCGCTAT CACGACATCG ACTCCGGCAC GCAGACCGCC
AGCTACGACG TATCGGGAAC GACCAGGACC ATCGCGTCGC AGTCGTTCAG CGCGGCGAAC
GGTCATCACT ACACGACCAT TGCATTGCCG AGCACGTCGT CGGCGATTTC GGTGATCGAC
GATCCCTTCG ACAAGAAGCT GCTGTCCGAC AAGGCGCGCG TGCGTAGCTT CAACGCGTCG
CCGAACGCGC AGAACGTCGA CGTCTACGTG GTCCCTCCGG GCACCGACAT CACGGCACAA
AGCCCGACGC TGGCCGGTGC GGCCTACCAG AATGCGGTGC CGGCATCCGG ACAGGATTCC
GTCTACCTGA ACGGCGGCAC GTACCAGGTG ATCGTCACGA CGGCAGGCAG CAAGACGCCG
ATCCTGAAGA CCCCGCCCGT CGCGCTCAAC AACAACGCCG ACTGGCTGCT GCTGACGATT
CCGGCCGGCG GTATTAGCGA CGTGATACCC AACGACGTTC ACGTGCTCGT TGCGCAAGGC
AACGATGCGG ACACGTCCGC GCAGGAACTC GGCCCGCAGT AA
 
Protein sequence
MKSIRTIVAL CSVISVLAAC GGGDDVGTEL GISKPQARFI NAVPAGPNLD YYLNAKVDAS 
GIAYKGVTRY HDIDSGTQTA SYDVSGTTRT IASQSFSAAN GHHYTTIALP STSSAISVID
DPFDKKLLSD KARVRSFNAS PNAQNVDVYV VPPGTDITAQ SPTLAGAAYQ NAVPASGQDS
VYLNGGTYQV IVTTAGSKTP ILKTPPVALN NNADWLLLTI PAGGISDVIP NDVHVLVAQG
NDADTSAQEL GPQ