| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3425 |
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| Symbol | |
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| ID | 4312160 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 220536 |
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| End bp | 221513 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638151267 |
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| Product | type II secretion system protein |
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| Protein accession | YP_775313 |
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| Protein GI | 115358175 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4965] Flp pilus assembly protein TadB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.263373 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.657196 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGCCCG CCGACCTGTT CGCGCTCGGC GCGTTCGTCG TGATCCTCGT GATCGGCCTC
ATGCTGTCCG CGCTGCTCGA TCGCGCGCGG CAGGCGCCGG AGCAGCGCAT TCGCGAGCGG
ATGCGGCGCC TCGCGCCGTC GCTGGCGGGC CGCGAGGCCG GTGCCAACGC CACGCCCGGC
GTCGCGCTGT TCAACCTGCC GCGCCGGCAG GGCCGCGTGC GTGCGTGGCT GCAGCGCTAC
GTGACGCGCG TGCGCGCGGT CGGCGGCGAG CGCGGGATGC GGATCGTCAT CGCCAGCGCG
ATCGTCGGCG AGATCGCGGC GATCGTCGCG ATGAAGCTCG TCGCGCTGCC GAGCGTCCTG
CATCCACTGA TCTACGTCGG GTTGCCGCTG CTGGCGATGC GCACCAGCTA TCGCGCGCTG
GTCGAGCGCT TCCGGCTGCG CTTTCTCGAA GCGTTCCCCG ACGCGATCGA CCTGATCGTG
CGTGCGGTGC GCGCGGGCAT TCCGGTCACG CAGGCGATCA GCACGGTCGG CGACAGCGCG
GCGGAGCCGG TGCGCTCGAC CTTCCGCACG ATGGGCGACA GCCTGCGCGT GGGCGTGGAT
CTGAAGGACG TGCTGACGCA GGCGTCTGAC CGGCTGATGA TCGCGGACTT CTCGTTCTTC
ACCGTCTACC TGCTGCTGCA GCGCGAGACC GGCGGCAGCC TCGGCGAAAC GCTCGACGAG
TTGTCGAGCA TCATCCGCAC GCGCCGCGAC ATCCGCCTGA AAACGCGTGC GTTGACCGCC
GAAGGGCGGA TCACGACGAA GATCATTTCG GCCGTGCCGT TCGTGATGAT CGGCGCGCTG
TTCCTCGTGA ACCGCTCGTA CGTGATGCTG CTGTTCGACA CGCACGCGGG CCACGTGATG
CTGACGATCG CCGCCGTGCT GCTGACGATC GGACTGCTGA CGATCAACAA GATCTCGAAA
CTGGATACCG CGCGATGA
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| Protein sequence | MRPADLFALG AFVVILVIGL MLSALLDRAR QAPEQRIRER MRRLAPSLAG REAGANATPG
VALFNLPRRQ GRVRAWLQRY VTRVRAVGGE RGMRIVIASA IVGEIAAIVA MKLVALPSVL
HPLIYVGLPL LAMRTSYRAL VERFRLRFLE AFPDAIDLIV RAVRAGIPVT QAISTVGDSA
AEPVRSTFRT MGDSLRVGVD LKDVLTQASD RLMIADFSFF TVYLLLQRET GGSLGETLDE
LSSIIRTRRD IRLKTRALTA EGRITTKIIS AVPFVMIGAL FLVNRSYVML LFDTHAGHVM
LTIAAVLLTI GLLTINKISK LDTAR
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