| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3421 |
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| Symbol | |
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| ID | 4312156 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 216099 |
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| End bp | 217481 |
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| Gene Length | 1383 bp |
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| Protein Length | 460 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638151263 |
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| Product | type II and III secretion system protein |
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| Protein accession | YP_775309 |
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| Protein GI | 115358171 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4964] Flp pilus assembly protein, secretin CpaC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.195466 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.703201 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGCGCA TGGTTCGTTG GATCGCTTTC TGGTGTCTGG CCTGCATCGT CGCGCCGGGC
GTCGCGCTCG CGCAGCGCGC GCACGCGGTC GAAGCCGGCG CGACGTTGTC GATCGCGACC
GGCAAGGGCG AGATGCTGTC GCTGTCCGAA CCAGCGACCG CGATGTTCGT CGCGGATCCG
AGCATCGCCG ACATCCAGGT GCCGTCGCCG CGCACCGTGT TCGTGTTCGG CAAGAAGGCC
GGCACCACCA CGCTGATCGC GCTCGGCGCG AACCATCGTC CGATCCTGCG CAAGACGGTG
ATCGTGCAGG TCGACACCGT ATCGCTGCAG GCGGTGCTCG ACAGCCGCTT TCCGCAATTG
AAGCTGTCGG TGTCCGGCGC GCCGGGCTCG CTGATGGTGT CGGGCAAGGT GCCGAGCGCG
GCCGACGCGG ACGCCGTGAT GCAGTCGCTC GCGCCCTACC TGAACGACAA GGAAAGGATC
GTCAACCGGC TCACCCTGTC GCGCCCGATC CAGGTGAACC TGCGCGTGCG CGTGACCGAA
GTGAGCCGCA ACGTCACGCA GCAGCTCGGC ATCAACTGGA GCTCGCTCGG CGCGGCCGGC
AACTTCATCG GCGGGCTGTT CAACGGGCGC ACGCTGATGG ATCCGACGAA CAGGCTGTTC
AACCTGTCGC CGACCGGCGC GTACTCGGTG CTCGGCGGCT TCCACACAGG GCGCTGGTCG
ATCGACGTCG TGCTCGACGC GCTCGACCAG GAAGGGCTGA TCACGATGCT CGCGGAGCCG
AACCTCACCG CGATGTCCGG CCAGACCGCG AGCTTCCTCG CGGGTGGCGA GATTCCGATT
CCGGTCGCGC AGGCCGGCAA CACGACCGGC GCGATCACGG TCGAGTTCAA GCCGTTCGGC
GTGTCGCTCG ATTTCACGCC GACCGTGCTC GCCGACAACC GGATCAGCCT GAAGGTGCGT
CCGGAAGTGA GCGAGGTCGA CGCGAACAAC AGCGTGACGA CCGGCGGCGT GACGGTGCCG
GGGCTCACCG TGCGGCGCGT CGAGACGACG GTCGAACTGT CCAGCGGGCA GAGCTTCGCG
ATCGGCGGGC TGCTGCAGAG CCAGACGGCC AATACCGTGT CGCAGATTCC GGGGCTCGGC
CGGCTGCCGA TCATCGGCCG GCTGTTTTCG TCGAAGAACT TCCAGGACAA CAAGACCGAG
GTCGTCGTGA TCGTGACGCC GTACATCGTG CAGCCGACCG GCCCCGGCCA GCTCGAACAG
GCGCTCGACA CCGTCGCCCG GCCGAGCAGC GATCTCGAGT TCGCGGTGCA GCGCAATCTC
GGGCTCGATC TGATGTCGGG CGAAACGCCG CGCCCCGTCG GCGCCGCGGG CTTCGTGTAT
TGA
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| Protein sequence | MVRMVRWIAF WCLACIVAPG VALAQRAHAV EAGATLSIAT GKGEMLSLSE PATAMFVADP
SIADIQVPSP RTVFVFGKKA GTTTLIALGA NHRPILRKTV IVQVDTVSLQ AVLDSRFPQL
KLSVSGAPGS LMVSGKVPSA ADADAVMQSL APYLNDKERI VNRLTLSRPI QVNLRVRVTE
VSRNVTQQLG INWSSLGAAG NFIGGLFNGR TLMDPTNRLF NLSPTGAYSV LGGFHTGRWS
IDVVLDALDQ EGLITMLAEP NLTAMSGQTA SFLAGGEIPI PVAQAGNTTG AITVEFKPFG
VSLDFTPTVL ADNRISLKVR PEVSEVDANN SVTTGGVTVP GLTVRRVETT VELSSGQSFA
IGGLLQSQTA NTVSQIPGLG RLPIIGRLFS SKNFQDNKTE VVVIVTPYIV QPTGPGQLEQ
ALDTVARPSS DLEFAVQRNL GLDLMSGETP RPVGAAGFVY
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