Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_3420 |
Symbol | |
ID | 4312155 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | + |
Start bp | 215016 |
End bp | 216044 |
Gene Length | 1029 bp |
Protein Length | 342 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 638151262 |
Product | Flp pilus assembly CpaB |
Protein accession | YP_775308 |
Protein GI | 115358170 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3745] Flp pilus assembly protein CpaB |
TIGRFAM ID | [TIGR03177] Flp pilus assembly protein CpaB |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.915611 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.685338 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCAAAC CCCTGAGAAT GGCCGTGCTG ATCATCGCTG CCGGCATCGG TGCGTTCATC CTGCGCCAAC TGTATGTTTC CGCGTCGACA CCGCCGCCGC CCGGTAACAC GGCCGACGTA CGCGTGCGGG TCGCCGCGGC GGACCTTCCT GAAGGGCTGC TGCTGCGCGA CAACGATCTC GCGTGGAAGC CCATGGCGCG CGCGCAGGTG CCGGCCGGCG CGTTCGTCGA ATCGCAACCG GGCGCGGACC TGAAGGGCGC GCTGCTGCGC AGCCGCGTCG AAGCGGGCGC GCCGATCCGC GCGGACAACG TGATTTCGGC GGGCGCGCCG GATTTTCTCG CCGCCGCGCT GCAGCCCGGC ATGCGCGCGA TCTCGGTGCC GGTCGACGAC GTGTCGGGCA ACGCGGGGCT GATCCAGCCG GGCGACTTCG TCGACGTGGT GCTCACGCAG CAGATCGGCG GCTCCGCGAC GACGCCCGGC ACGTTCGAAG CGGAGACGGT CGTGCGGCGC GCGCGCGTGC TCGCGGTCGG CTCGGAATTC CAGCGCGCGA AGGGGCCGGC GAGCGCGCCG GACGCGCCGG TCCGCGCGCG CACGGTCACG CTCGAGGTCG CGCCGCGCAC CGCGCAGGTC GTGCTGGTCG CGACGCGCCT CGGTTCGCTG TCGCTCGCGC TGCGCAGCTT CGCGACGAGC GACCGCCGCC AGGCGGCCGG CGGCGACGAA CAGGAGCCCG ATACGCCGCC GGTATGGGCC GGCGACGTAT CGCGCGCGGC CCGCGAAGCG GCGCGTGCGC CGGCTGCGCG CACGGATACT GGCACGCGCC CGTCGCAAGG CAACACGGTC GTGATCTATC GCGGCTCGTC GGTCGACGAT GGATCGCGCG CCGGCGGCAC CGGCACGCCG GGCGTGCCGC CGCTGCCGGC CGGTTGGCCG GGCACGCCTG TTGCACCGGT TGCGCCGGCC GCACCCGTGG GCGGCAATGC GACGGCGGAC GCGGCGACGC AAGCGCCGCG GACCACGACG GTGCAGTGA
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Protein sequence | MPKPLRMAVL IIAAGIGAFI LRQLYVSAST PPPPGNTADV RVRVAAADLP EGLLLRDNDL AWKPMARAQV PAGAFVESQP GADLKGALLR SRVEAGAPIR ADNVISAGAP DFLAAALQPG MRAISVPVDD VSGNAGLIQP GDFVDVVLTQ QIGGSATTPG TFEAETVVRR ARVLAVGSEF QRAKGPASAP DAPVRARTVT LEVAPRTAQV VLVATRLGSL SLALRSFATS DRRQAAGGDE QEPDTPPVWA GDVSRAAREA ARAPAARTDT GTRPSQGNTV VIYRGSSVDD GSRAGGTGTP GVPPLPAGWP GTPVAPVAPA APVGGNATAD AATQAPRTTT VQ
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