| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3420 |
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| Symbol | |
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| ID | 4312155 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 215016 |
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| End bp | 216044 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 638151262 |
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| Product | Flp pilus assembly CpaB |
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| Protein accession | YP_775308 |
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| Protein GI | 115358170 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3745] Flp pilus assembly protein CpaB |
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| TIGRFAM ID | [TIGR03177] Flp pilus assembly protein CpaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.915611 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.685338 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAAAC CCCTGAGAAT GGCCGTGCTG ATCATCGCTG CCGGCATCGG TGCGTTCATC
CTGCGCCAAC TGTATGTTTC CGCGTCGACA CCGCCGCCGC CCGGTAACAC GGCCGACGTA
CGCGTGCGGG TCGCCGCGGC GGACCTTCCT GAAGGGCTGC TGCTGCGCGA CAACGATCTC
GCGTGGAAGC CCATGGCGCG CGCGCAGGTG CCGGCCGGCG CGTTCGTCGA ATCGCAACCG
GGCGCGGACC TGAAGGGCGC GCTGCTGCGC AGCCGCGTCG AAGCGGGCGC GCCGATCCGC
GCGGACAACG TGATTTCGGC GGGCGCGCCG GATTTTCTCG CCGCCGCGCT GCAGCCCGGC
ATGCGCGCGA TCTCGGTGCC GGTCGACGAC GTGTCGGGCA ACGCGGGGCT GATCCAGCCG
GGCGACTTCG TCGACGTGGT GCTCACGCAG CAGATCGGCG GCTCCGCGAC GACGCCCGGC
ACGTTCGAAG CGGAGACGGT CGTGCGGCGC GCGCGCGTGC TCGCGGTCGG CTCGGAATTC
CAGCGCGCGA AGGGGCCGGC GAGCGCGCCG GACGCGCCGG TCCGCGCGCG CACGGTCACG
CTCGAGGTCG CGCCGCGCAC CGCGCAGGTC GTGCTGGTCG CGACGCGCCT CGGTTCGCTG
TCGCTCGCGC TGCGCAGCTT CGCGACGAGC GACCGCCGCC AGGCGGCCGG CGGCGACGAA
CAGGAGCCCG ATACGCCGCC GGTATGGGCC GGCGACGTAT CGCGCGCGGC CCGCGAAGCG
GCGCGTGCGC CGGCTGCGCG CACGGATACT GGCACGCGCC CGTCGCAAGG CAACACGGTC
GTGATCTATC GCGGCTCGTC GGTCGACGAT GGATCGCGCG CCGGCGGCAC CGGCACGCCG
GGCGTGCCGC CGCTGCCGGC CGGTTGGCCG GGCACGCCTG TTGCACCGGT TGCGCCGGCC
GCACCCGTGG GCGGCAATGC GACGGCGGAC GCGGCGACGC AAGCGCCGCG GACCACGACG
GTGCAGTGA
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| Protein sequence | MPKPLRMAVL IIAAGIGAFI LRQLYVSAST PPPPGNTADV RVRVAAADLP EGLLLRDNDL
AWKPMARAQV PAGAFVESQP GADLKGALLR SRVEAGAPIR ADNVISAGAP DFLAAALQPG
MRAISVPVDD VSGNAGLIQP GDFVDVVLTQ QIGGSATTPG TFEAETVVRR ARVLAVGSEF
QRAKGPASAP DAPVRARTVT LEVAPRTAQV VLVATRLGSL SLALRSFATS DRRQAAGGDE
QEPDTPPVWA GDVSRAAREA ARAPAARTDT GTRPSQGNTV VIYRGSSVDD GSRAGGTGTP
GVPPLPAGWP GTPVAPVAPA APVGGNATAD AATQAPRTTT VQ
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