| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3416 |
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| Symbol | |
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| ID | 4312276 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 210851 |
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| End bp | 212437 |
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| Gene Length | 1587 bp |
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| Protein Length | 528 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638151258 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_775304 |
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| Protein GI | 115358166 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.680015 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGCGT CACTGCTGCT CGCCGGCGGA TTCACGCACG CGTTCGCCGC GCCGGCCGGC
AAGACGCTCG TGTACTGCAG CGAAGGCAGC CCGGCCGGCT TCGATCCGGG CCAGCACACG
ACCAGCACCG ATTTCGACGC GAGCACGTAC ACGATCTACA ACGGGCTCGT GCAGTTCAAG
CGCGGCACGC TCGATCTCGT CCCGTCGCTC GCGACGAGCT GGGACGTGTC GTCCGACCAG
CGCGTCTACA CGTTCCATCT GCGGCGCGGC GTGAAGTTCC AGACGACCGC GTGGTTCAAG
CCGACGCGTC CGTTCCAGGC CGACGACGTC GTGTTCACGT TTGGCCGGAT GCTCGACGCC
GACAGTCCGT TTCGCAAGGC CTATCCGGTC AGCTTCCCGT ACTTCAGCGA TCTCGGTTTC
GACCGCAACA TCGAGCGCAT CGAAAAGGTC GACGACGACA CGGTGCGCTT CGTGCTGAAG
TCGCCCGACG TCGTGTTCGT GCGCAATCTC GCGATGGCGT TCGCGTCGAT CCTGTCAGCC
GAATATGCGT CGCAGCTGGC CGCACGCCAC CGCGAGGCCG ACATCAACCA GCTTCCGGTC
GGCACCGGGC CGTTCCAGCT GCGTGCGTAC CAGAAGGACG CGGTGATCCG CTACGACGCG
AACCCCGACT ACTGGAAGCC GGACGACGTG AAGCTCGCGC ATCTCGTGTT CGCGATCACG
CCCGACCCGG CCGCGCGCCT GCAGAAGCTC ACGGCCGGCG AGTGCCAGGT GTCGGTGTTC
CCGCGGCCGG CCGATCTGGA GACGGTGCGG CGCGATCCGA AGCTGACGCT GTTTTCGGGG
ACCGGTTTCA ACGTCGGCTT CGTCGCATAC AACACGCAGC ATCCGCCGCT CGATCGCGTC
GACGTGCGGC GCGCGCTCGA CATCGCGATC GACAAGACGG CGATCATCAA GACTGTGTTC
AACGGCGACG CGACGATCGC GACGAACCCG ATGCCGCCCG CGCAATGGTC GTACAACCCG
CGGCTGAAGG ACGCGCCGCG CGATCCGGCG GCCGCGAAGG CGCTTCTCGC GCAGGCGGGA
TTCCCGAACG GCTTCGACCT GACGCTGTGG GCGATGCCGG TGCAGCGGCC GTACAACCCG
AACGCGCAGC TGATGGCGCA ACTGATCCAG CAGGACTGGG CGAAGATCGG CGTGCGCGCG
AAGATCGTCA GCTACGAATG GGGCGAATAC AACCGCCGCG CGAAACGCGA CGGGCAGCAC
GACGCGATCC TGTACGGCTG GTCGGGCGAC AACGGCGACC CCGACAACTG GCTCGGCACG
CTGCTCGGTT GCGACGCGGT GCACGGCAGC AATCTCGCGA AGTGGTGCAA TGCGGATTTC
GAGCGGCTCG TCGGCGCGGC GCGCACGAAC GCGGACGTCG CGAAACGCAC GTCGCTTTAC
GAGCAGGCGC AGGTCGTGTT CAAGGATCAG GTGCCGTTCA CGCCGATCGC GACGTCGATC
GTGTCGCTGC CGATTTCGAA GCGCGTGCAC GGGGTGACGT TCTCGCCGCT CGGTGGGCAT
CGGTTCGATG GGGTGTGGCT GGAGTGA
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| Protein sequence | MAASLLLAGG FTHAFAAPAG KTLVYCSEGS PAGFDPGQHT TSTDFDASTY TIYNGLVQFK
RGTLDLVPSL ATSWDVSSDQ RVYTFHLRRG VKFQTTAWFK PTRPFQADDV VFTFGRMLDA
DSPFRKAYPV SFPYFSDLGF DRNIERIEKV DDDTVRFVLK SPDVVFVRNL AMAFASILSA
EYASQLAARH READINQLPV GTGPFQLRAY QKDAVIRYDA NPDYWKPDDV KLAHLVFAIT
PDPAARLQKL TAGECQVSVF PRPADLETVR RDPKLTLFSG TGFNVGFVAY NTQHPPLDRV
DVRRALDIAI DKTAIIKTVF NGDATIATNP MPPAQWSYNP RLKDAPRDPA AAKALLAQAG
FPNGFDLTLW AMPVQRPYNP NAQLMAQLIQ QDWAKIGVRA KIVSYEWGEY NRRAKRDGQH
DAILYGWSGD NGDPDNWLGT LLGCDAVHGS NLAKWCNADF ERLVGAARTN ADVAKRTSLY
EQAQVVFKDQ VPFTPIATSI VSLPISKRVH GVTFSPLGGH RFDGVWLE
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