| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3410 |
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| Symbol | |
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| ID | 4312270 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 205619 |
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| End bp | 206335 |
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| Gene Length | 717 bp |
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| Protein Length | 238 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638151252 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_775298 |
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| Protein GI | 115358160 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.460296 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.201929 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAATCGA CTGTATCGAA CGCCAGCACA CCCTCGATCC TGCTCATCGC GGCCTCGCGC
GGCCTCGGGC TCGCGATGGC GGAGCACTTC CTGAACAAGG GCTGGCATGT CACCGGCACC
GTCCGCGCCG GGTCGGGGCG CACGAAGCTG CATGAACTCG CCGAGCGCTT CGGCGAACGG
CTCGAAATCG ACACGCTCGA CATCTGCGCG CCGGACCAAC TGGCTGCGTT GCGCGCACGC
CTGTCGGGCC GGCGCTTCGA CATGCTGTTC GTGAATGCCG GCACGACCAA CGATCCGAAC
GAAACGATCG GCGAAGTCAC GACGGACGAG TTCGTGCGCG TGATGATCAC GAACGCGCTG
GCGCCGATGC GCGTGATCGA GGCGTTGCAC GATCTCGTGC CCGAAGGCGG CCTGATCGGC
GCGATGTCGT CGGGGCAGGG CAGTGTCGCG AACAACGTGA GCGGCATGCG CGAGGTCTAC
CGCGGCAGCA AGGCCGCGCT GAACCAGTTC ATGCGCAGCT TCGCGGCGCG CCAGGCCGCT
ACGCCGCGCG CGATGGTGCT GATGGCGCCG GGCTGGGTTC GGACGGAACT CGGCGGCCCC
GATGCGCGAC TGACGATCGA CGAAAGCGTG CCGAGCCTCG TGAACGTGCT GATCGGCAAG
CAGCGGCGCG CGGGGCTCGA ATACCTCGAT TACCAGGGGC GCACGGTGCC GTGGTAG
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| Protein sequence | MQSTVSNAST PSILLIAASR GLGLAMAEHF LNKGWHVTGT VRAGSGRTKL HELAERFGER
LEIDTLDICA PDQLAALRAR LSGRRFDMLF VNAGTTNDPN ETIGEVTTDE FVRVMITNAL
APMRVIEALH DLVPEGGLIG AMSSGQGSVA NNVSGMREVY RGSKAALNQF MRSFAARQAA
TPRAMVLMAP GWVRTELGGP DARLTIDESV PSLVNVLIGK QRRAGLEYLD YQGRTVPW
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