Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_3408 |
Symbol | |
ID | 4312268 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | - |
Start bp | 202925 |
End bp | 204313 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638151250 |
Product | uracil-xanthine permease |
Protein accession | YP_775296 |
Protein GI | 115358158 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG2233] Xanthine/uracil permeases |
TIGRFAM ID | [TIGR00801] uracil-xanthine permease [TIGR03173] xanthine permease |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.604039 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.0616677 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACCCG CTTCCCCCGC CCGATCCGCC GCCCACGGCG CCGCCGACAC CGATCCGTCG CACGACCTCG TCTATGGCCC CAATGACCGG CCCGCGCCGA TGGTCGCCTT CGTCGCCGCG CTGCAGCACC TGCTGGCGAT CATCGTGCCG ATCGTCACGC CCGGCCTGCT GATCTGCCAG GCGCTCGGCG TATCGAGCCG GGACACCACG CTCATCGTGT CGATGTCGCT CGTGATTTCC GGCATCGCCA CCTTCGTGCA GTGCAAGCGC TTCGGCCCGC TGGGCGCCGG CCTGCTGATC GTGCAGGGCA CCAGTTTCAA CTTCGTCGGC CCGCTGATCG CCGGCGGCAG CGTGATGGTC AAGCAGGGCA CGCCGGTCGA GACCGTGATG GCCGCGATCT TCGGCGTCGT GATCGCCGGT TCGTTCGTCG AGATGGCCGT GTCGCGCATC CTGCCGTTCG TGAAGCGCCT GATCACGCCG CTCGTCACCG GCATCGTCGT GCTGCTGATC GGCCTCACGC TGATCAAGGT CGGCCTCATC AGCATGGGCG GCGGCTACGG CGCGATGGCC AACGGCACGT TCGCGAGCGC GCAGAACCTG ACGCTGTCGT GCGTCGTGCT CGGCACGATC ATCCTGCTGA ACCGCGTGCC GATCGTGTGG GTGCGCAGCA CCGCGCTCGT GATCGCACTC GTGATCGGCT ATGCCGCGGC CGCCGTGCTC GGCCGCCTCG ACTTCACCGG CGTGCATCAG GCTGCGCTGT TCCAGGTCCC GACGCCGCTG CACTTCGGCA TCGGCTTCTC GTGGTCGCTG TTCGTGCCGA TGCTGATCAT CTACCTCGTC ACGTCGCTCG AAGCGATCGG GGACGTCACC GCCACCAGCA AGATTTCGAA GGAGCCAGTC GAAGGGCCGG TGTGGATGCG CCGGATCAAG GGCGGCGTGC TCGTGAACGG CGCGAACTCG CTGCTGGCCG GCGTGTTCAA CACGTTCCCG AGCTCCGTGT TCGCGCAGAA CAACGGCGTG ATCCAGATCA CCGGCGTCGC GAGCCGCCAC GTCGGCATCT GGATCGCCGG CATGCTCGTG GTGCTCGGCC TGTTCCCGGT CGTCGCGGGC GCGCTGCAGG CCGTGCCGGA GCCCGTGCTC GGCGGTGCGG CGATGGTGAT GTTCGGCGCG GTGGCCGCGT CGGGCATCAA CATCCTGTCC GGCATCCACC TCGATCGCCG CGCGCTGCTG ATCATCGCGG TGTCGCTCGC GCTCGGCCTC GGCGTATCTC AAGTGCCGGA CATTCTGAAC AGCCTGCCGC ATGCACTGAA GAACGTGCTG GAATCGGGCG TCGCCACGGG CGGCATCTGT GCGCTCGTGA TGAACTGGTT CCTGCCGGAA CAGAAGTAA
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Protein sequence | MQPASPARSA AHGAADTDPS HDLVYGPNDR PAPMVAFVAA LQHLLAIIVP IVTPGLLICQ ALGVSSRDTT LIVSMSLVIS GIATFVQCKR FGPLGAGLLI VQGTSFNFVG PLIAGGSVMV KQGTPVETVM AAIFGVVIAG SFVEMAVSRI LPFVKRLITP LVTGIVVLLI GLTLIKVGLI SMGGGYGAMA NGTFASAQNL TLSCVVLGTI ILLNRVPIVW VRSTALVIAL VIGYAAAAVL GRLDFTGVHQ AALFQVPTPL HFGIGFSWSL FVPMLIIYLV TSLEAIGDVT ATSKISKEPV EGPVWMRRIK GGVLVNGANS LLAGVFNTFP SSVFAQNNGV IQITGVASRH VGIWIAGMLV VLGLFPVVAG ALQAVPEPVL GGAAMVMFGA VAASGINILS GIHLDRRALL IIAVSLALGL GVSQVPDILN SLPHALKNVL ESGVATGGIC ALVMNWFLPE QK
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