| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3399 |
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| Symbol | |
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| ID | 4312259 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 196602 |
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| End bp | 197780 |
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| Gene Length | 1179 bp |
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| Protein Length | 392 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638151241 |
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| Product | mandelate racemase/muconate lactonizing protein |
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| Protein accession | YP_775287 |
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| Protein GI | 115358149 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.645647 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.408285 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATGC CGACGATACG CGCAGTCCGC GCGCTGACGG TGCGTGGTGG CGGTGCCGAC
TACCACGATC AGGATGCCGG TCACTGGATC GACGACCACA TTGCGACGCC GATGTCGCGC
TATCCCGAAT ACCGGCAGAG CCGCCAGTCG TTCGGCATCA ACGTGCTCGG CACGCTCGTG
ATCGAAATCG AGGCCAGTGA TGGAACGGTC GGCTTTGCCG TGACGACCGG CGGCGAGATC
GGCGCGTTCA TCGTCGAGCG GCATCTCGCG CGCTTCATCG AAGGGCAGCG CGTGACCGAT
ATCGAAAAGA TGTGGGATCA GATGTTCTAC GCGACGCTGT ACTACGGGCG CAAGGGTGTC
GTGCTCAATG CGATTTCCGG CGTCGATCTT GCGCTGTGGG ATCTGCTCGG CAAAGTGCGG
CAAGAGCCCG TGCACCAGTT GCTCGGCGGC AAGGTGCGCG ATGAGCTCGA GTTTTACGCA
ACCGGCGCAC GGCCGGATCT CGCGAAGGAA ATGGGCTTCA TCGGCGGCAA GCTGCCGCTG
CATCACGGCC CTGCCGAGGG GGACGCCGGT CTGCGCCGCA ATCTCGATGC GCTCGCCGAC
ATGCGCTCGC GCGTCGGCGA CGATTTCTGG CTGATGCTCG ACTGCTGGAT GAGTCTCGAC
GTGCCGTATG CGACACGGCT CGCGCACGGT GCGCACGCGC TCGGTCTGAA ATGGATCGAG
GAATGCCTGC CGCCGGACGA CTACTGGGGC TATGCGAAGC TGCGCCGCGA TGTGCCGCGC
GGCATGCTCG TCACGACCGG CGAGCACGAG GCGACCCGCT GGGGCTTCCG GATGCTGCTG
GAGATGGAGT GCTGCGACAT CATTCAGCCG GACGTGGGCT GGTGCGGCGG GCTCACCGAG
CTAATGCGCA TCTCGGCGCT CGCCGACGCG CGCGGCGTGC TGGTGATTCC GCACGGGTCG
TCGGTCTACA GCTATCACTT CGTCGCGACG CGGCACAACA GCCCGTTCGC CGAATTCCTG
ATGATGGCGC CGCAGGCGGA CCGCGTCGTG CCGATGTTCG ATCCGCTGCT GCTCGACGAA
CCGGTGCCGG TCGGCGGGCG GATGAAGGTG CCGGACACCG CCGGCTTCGG CGTGCGCCTG
AACCCGGACG TGCGCATGCA ACGCCCGTAT GAACACTGA
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| Protein sequence | MSMPTIRAVR ALTVRGGGAD YHDQDAGHWI DDHIATPMSR YPEYRQSRQS FGINVLGTLV
IEIEASDGTV GFAVTTGGEI GAFIVERHLA RFIEGQRVTD IEKMWDQMFY ATLYYGRKGV
VLNAISGVDL ALWDLLGKVR QEPVHQLLGG KVRDELEFYA TGARPDLAKE MGFIGGKLPL
HHGPAEGDAG LRRNLDALAD MRSRVGDDFW LMLDCWMSLD VPYATRLAHG AHALGLKWIE
ECLPPDDYWG YAKLRRDVPR GMLVTTGEHE ATRWGFRMLL EMECCDIIQP DVGWCGGLTE
LMRISALADA RGVLVIPHGS SVYSYHFVAT RHNSPFAEFL MMAPQADRVV PMFDPLLLDE
PVPVGGRMKV PDTAGFGVRL NPDVRMQRPY EH
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