Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_3396 |
Symbol | |
ID | 4312256 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | + |
Start bp | 193742 |
End bp | 194443 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 638151238 |
Product | GntR family transcriptional regulator |
Protein accession | YP_775284 |
Protein GI | 115358146 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.296167 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.56362 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGACTT CCGTTATGGC CGGCCGGGAG ACCGCGGCGC CGATGCGCAC GGGCCTCACG GTCAACGAGA TTTACGAGCA GCTGAAACAG ATGGCTGTGC TCTACAAGAT TCGACCGGGC GAGCGGTTCA ACGAGCTGGA ACTCGCCGAG CGCTTCAACG TGAGTCGCAC GCCGATTCGC GAGGCACTGA ACCGGCTCGT GGCCGAAAAC CTGCTGGTGT TCGTGCCGAA CCGCGGTTTC TTCATTCGGC AACTGGAGGG GAAGGATGTG TTCGATCTGT TCGAATTGCG CCGCTCGATC GAGTCGACCG CGGTGACGCT CGCATGCGAG CGCGCGTCGG ACAACGACAT CAAGGCGCTG CGGCGCTTCT GGAAGCAGGT GATGAAGAAT GCCGCGCGAA TGCCGTCGTC CGAGCTGGTC GTCAAGGACG AGCAGTTTCA TCTGGAGCTT GCCGCGTTGT CGGGCAATGC CGAGATCGGC CGGGTGCTTC AAGGGATCAA CGCGCGGATT CACTACGTGC GGTGGGTCGA TGTCGATCAG CGGCGCAACG AGGCGTTCAC CGAGCATCTC GAGATTCTCG ACGCGCTTGC CGAACGCGAT GCGGCGCGTT GCGCGGCGCT GACCGACACG CATATCCGCT GGCGGATGGA GGAGATCACG CGCGTCGTTC AGGCGAGCGT CGTCAAGCTG TACGCAAAAT AG
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Protein sequence | MSTSVMAGRE TAAPMRTGLT VNEIYEQLKQ MAVLYKIRPG ERFNELELAE RFNVSRTPIR EALNRLVAEN LLVFVPNRGF FIRQLEGKDV FDLFELRRSI ESTAVTLACE RASDNDIKAL RRFWKQVMKN AARMPSSELV VKDEQFHLEL AALSGNAEIG RVLQGINARI HYVRWVDVDQ RRNEAFTEHL EILDALAERD AARCAALTDT HIRWRMEEIT RVVQASVVKL YAK
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