| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3392 |
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| Symbol | |
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| ID | 4312252 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 189749 |
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| End bp | 190849 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638151234 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_775280 |
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| Protein GI | 115358142 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.577974 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGGCAA GTCAATGGAG TGTCGGTATC TGGATCGCGC TCGGGGCGGT TGCCTCTGGC
GCTACGCAGG CCGACGTCAG CGTGGGCGCG GTGCTGCCGC TGACCGGCGC GAGTGCGTCG
ATCGGCGAAG ACCAGCGCCG CGGCATCGAG CTCGCCGTCG CGCAGATCAA TGCGAAAGGC
GGCGTGCTGG GCCAGAAGCT CGCCGTGCGA ATCGAGGATT CGGGCGGCTC GGCCAACACC
GCCCTCGACG CGGCGCGCAA GCTCGCGACC GTCGAGCACG TGCCGGTCGT GCTCGGCGAA
TTCTCGTCGT CGGTGACGAT TCCCGTCGGA CAGTTCCTGG TACGCCAGGG CGACGTGCAC
ATCAACATCG GCTCGTCGAG TCAGCAAGTG CGCAAGATCG GCGCAGGCTC GTTCAGCGTG
ATCGGGCTGG ACGACCTGTC CGCGCGCTTC GCCGCTCAGG ACGTGTACGC CCGCAAGCTG
CGCCGCATCG CGCTGATCGC GCCGAACAAC GGCTATGGCC AGGGCATCGC GGGCGAGTTC
AGGAAGCGTT TCGAGGCGCT CGGCGGCACG GTGGTGTCGA CGGTGCTCTA CACGGAAGGA
CAATCGACCT ATCGCCGCGA ACTGGAGCAG GCGTCGCGCG CGCAGCCCGA CGCGTATGTC
TACAGCGCAT ACGGCCAGGA GGCCGCGACG CTGAACCGGC AGGCATTCGA GATGCGGCTC
AACCAGCATC CGTGGTACGG CATCTATCTG ACGATGTGCA CGAGCGACAC GCCTGCGCAG
ATCGCGCAAG GCCAGATCGG CCTGGAGGTC GCCGCGCTCG GCGCGGGCGC GAAAGCGTAT
GCGAGCGCCT ATCAAGCCGC GTACAACGAG GCCCCGCGAT CGGCGTTCGG CAGCTATGCG
TACGACGCGA CGCTGTTGTC CGCCGCGGCG ATCGGCCGCG CGCAATCCAT CGACCCGGCG
AAGATTCGTA CGGCGCTCGC GGCATTGGGC AAGTCGTATA CCGGCGTGAC CGGCGCGATC
GCGTTCGATG CCGACGGCCA GCGGGAAGTC CAGCCCTACG AGAAGGTGGT CTACCGCCAA
TCGGTCGTCG CGCAGCAGTG A
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| Protein sequence | MKASQWSVGI WIALGAVASG ATQADVSVGA VLPLTGASAS IGEDQRRGIE LAVAQINAKG
GVLGQKLAVR IEDSGGSANT ALDAARKLAT VEHVPVVLGE FSSSVTIPVG QFLVRQGDVH
INIGSSSQQV RKIGAGSFSV IGLDDLSARF AAQDVYARKL RRIALIAPNN GYGQGIAGEF
RKRFEALGGT VVSTVLYTEG QSTYRRELEQ ASRAQPDAYV YSAYGQEAAT LNRQAFEMRL
NQHPWYGIYL TMCTSDTPAQ IAQGQIGLEV AALGAGAKAY ASAYQAAYNE APRSAFGSYA
YDATLLSAAA IGRAQSIDPA KIRTALAALG KSYTGVTGAI AFDADGQREV QPYEKVVYRQ
SVVAQQ
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