| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3381 |
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| Symbol | |
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| ID | 4312241 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 177920 |
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| End bp | 179356 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638151222 |
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| Product | selenocysteine synthase |
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| Protein accession | YP_775269 |
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| Protein GI | 115358131 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1921] Selenocysteine synthase [seryl-tRNASer selenium transferase] |
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| TIGRFAM ID | [TIGR00474] seryl-tRNA(sec) selenium transferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCGAAC CGGGTTTGAA TGAACTGAAT GCCGTCCTCG CGCGCGTACC GTCGGTCGAG
CGCGTGCTGT CGTCGGCGCC ACTGCAGCCG CTGCTCGCCG ACTATGGCCG CACGCGCGTG
CTGAACGCGG TGCGCGCCGA ACTCGAACGC TGGCGTACCG CCGCGCAGCA GGATCCGGCG
GCGGCCGAGC CGCTCGACGA GCCGCGCATC GCGGCAGCGG TCGCCCGCAC GCTGGCGGCG
CGGAGCGCGG GCGCCGTGCG CGCGGTGTAC AACCTGACGG GCACCGTGCT GCACACCAAT
CTCGGGCGCG CGCTGTTGCC CGACGACGCG GTGCGCGCGG TGGTCGACGC GCTTACGCAG
CCTGTGAATC TCGAATTCGA TCTCGCCACC GGCCGCCGCG GCGACCGCGA CGATCTGATC
GACGATCTGC TGTGCGAACT GACCGGCGCG CAAGCCGCGA CCGTCGTCAA CAACAATGCC
GCGGCCGTGC TGCTCACGCT GTCGGCGCTG GCAACGAAGA AGGAAGTCGT CGTGTCGCGC
GGCGAACTGG TCGAGATCGG CGGCGCATTC CGCATTCCGG ACATCATGAG CCGCGCCGGT
GCGAAGCTGC ATGAAGTCGG CACGACCAAC CGCACCCATC TGCGCGACTA CGCCGAGGCC
ATCGGCCCGC GCACGGCGAT GCTGATGAAG GTGCACTGCA GCAATTACGC GATCAGCGGC
TTCACGAAGG AAGTGACGCT GGCCGAACTC GCGCCGCTTG CGCGCGAGCA CGGGCTGCCG
GTGGCGGTCG ATCTCGGCAG CGGCACGCTC GCCGATCTGT CGCAATGGGG CCTGCCGCAC
GAGACGACCG TGCAGGAAAC CATCGCGGCC GGCGCGGACC TCGTCACGTT CAGCGGCGAC
AAGCTGCTCG GCGGGCCGCA AGCCGGCCTG ATCGTCGGCG ATCGCGCGCT CGTTGCGAAG
ATCAAGAAAC ACCCGCTCAA GCGCGCGCTG CGCGTCGGCA AGCTGACGCT CGCCGCGCTC
GAACCCGTGC TCCGGCTCTA CCAGGCGCCG GAATTTCTGT GCGAGCGGCT CACGACGCTG
CGGCTGCTGA CGCGGCCGCA ACGCGACATC ACCGAGGCCG CCCAGCGCGT GCGTCCGGCG
TTGCAGGCCG CTCTCGGCAG CGGCTTCGAC GTGCGCGTCG AGCCGATGTT CAGCCAGATC
GGCAGCGGTG CGCTGCCGCT CGATCAGTTG CCGAGCGCCG GGCTCGTCGT GCGCACGCCG
GACGGCAAGC GCGGCGGCCG TGCGCTCGCG CAGCTCGAGA AGCGGCTGCG CGAATGGCCG
CGTCCGGTGA TCGGCCGCGT GGCCGACAAT GCGCTGCGAC TCGATCTGCG TTGCCTCGAA
GCGGCCGACG AAGCGACATT CGTCGCGCAA TGCGTGCGGA TCGAAAAGGC CCACTGA
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| Protein sequence | MSEPGLNELN AVLARVPSVE RVLSSAPLQP LLADYGRTRV LNAVRAELER WRTAAQQDPA
AAEPLDEPRI AAAVARTLAA RSAGAVRAVY NLTGTVLHTN LGRALLPDDA VRAVVDALTQ
PVNLEFDLAT GRRGDRDDLI DDLLCELTGA QAATVVNNNA AAVLLTLSAL ATKKEVVVSR
GELVEIGGAF RIPDIMSRAG AKLHEVGTTN RTHLRDYAEA IGPRTAMLMK VHCSNYAISG
FTKEVTLAEL APLAREHGLP VAVDLGSGTL ADLSQWGLPH ETTVQETIAA GADLVTFSGD
KLLGGPQAGL IVGDRALVAK IKKHPLKRAL RVGKLTLAAL EPVLRLYQAP EFLCERLTTL
RLLTRPQRDI TEAAQRVRPA LQAALGSGFD VRVEPMFSQI GSGALPLDQL PSAGLVVRTP
DGKRGGRALA QLEKRLREWP RPVIGRVADN ALRLDLRCLE AADEATFVAQ CVRIEKAH
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