| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3377 |
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| Symbol | |
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| ID | 4312237 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 172784 |
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| End bp | 175252 |
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| Gene Length | 2469 bp |
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| Protein Length | 822 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638151218 |
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| Product | formate dehydrogenase, alpha subunit |
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| Protein accession | YP_775265 |
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| Protein GI | 115358127 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR01553] formate dehydrogenase, alpha subunit, proteobacterial-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.365346 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.791414 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCAGGTC TTGCCCCGAC GTTTGGCCGT GGAGCGATGA CGAACCATTG GGTCGACATC
AAGAACGCGG ACGTGATTCT CGTGATGGGC GGCAATGCAG CCGAGGCCCA TCCGTGCGGT
TTCAAGTGGG TAACGGAGGC GAAGGCGCAC CGCAAGGCGC GGCTGATCGT CGTCGACCCG
CGCTTTACGC GTACGGCCTC GGTGGCCGAC TACTACGCGC CGATTCGCAC CGGCACCGAC
ATCGTCTTCC TGGGCGGCGT CATCAACTAT CTGCTGACGA ACGACAAGAT TCAGCATGAG
TACGTGAAGA ACTACACGGA CTTCTCGTTC ATCGTGCGCG AGGATTTCGC GTTCAACGAC
GGCATCTATT CCGGCTATGA CGCCGAGAAG CACGCGTATC CGGACAAATC GAGCTGGGAC
TACGAGCGCG GCGACGACGG CTTCGTGAAG GTCGACCCGA CGCTGCAGCA TCCGCGCTGC
GTGTACAACC TGATGAAGCA GCATTACGCG CGCTATACGC CGGACATGGT CCAGCAGACG
TGCGGCACGC CGAAGGAGAA ATTCCTGAAG GTGTGCGAGA TGCTCGCGAC CACGGCCGTT
CCCGGCCGCG CCGGCACGGT GCTGTACGCG CTCGGCTGGA CCCATCACTC GATCGGCTCC
CAGATGATCC GCACCGGCGC GATGGTGCAA CTGCTGCTCG GCAACATCGG CATCGCCGGC
GGCGGGATGA ACGCGCTGCG CGGCCACTCG AACATCCAGG GCTTGACCGA CCTCGGGCTG
ATGTCGAACC TGCTGCCGGG CTACATGACA CTGCCGATGC AGGCCGAACA GGATTTCGAC
GGCTACCTCA AGAAGCGCAC GCAGCAGCCG CTGCGGCCCA ACCAGCTGAG CTACTGGAAG
AACTACAAGG CCTTCCACGT GAGCTTCATG AAGTCGTGGT GGGGCGATGC GGCGACCGCC
GAGAACAACT GGGGCTACGA CTACCTGCCG AAGCTCGACA AGCAGTACGA CCTGCTGCAG
GCGATCGAGC TGATGAATGA AGGCAAGATG ACCGGCTACA TCTGCCAGGG CTTCAACCCG
CTCGCGGCGG CGCCGTCTAA GGTGAAGACG GCCGCCGGGC TCGCGAAGCT GAAGTGGCTC
GTCATCATGG ATCCGCTCGC GACCGAGACG TCCGAGTTCT GGAAGCATCA CGGCGACTAC
AACGACGTCG ACGCGTCGAA GATCCAGACC GAGGTGTTCC GTCTGCCGAC CACCTGCTTC
GCGGAGGAAG ACGGCTCGCT CGTGAGTTCG AGCCGCGTGC TGCAATGGCA CTGGAAGGGC
GCGGAGCCGC CAGGCGAGGC GAAGAGCGAT CTCGAGATCA TGTCGGGGCT GTTCCTGCGC
ATGCGCAAGA TGTACCAGAA GGACGGCGGC AAGTATCCGG ACCCGATCGT GAACCTGACC
TGGCCGTATG CGAACCCGGA AAGCCCGACG CCTGCCGAGC TCGCAATGGA GTTCAACGGG
CGTGCGCTTG CCGATCTGCC GGATCCTAAG GATCCGACGA AGACGCTCGT GAAGAAGGGC
GAGCAACTCG CGGCGTTCGC GCAACTGAAG GACGACGGCA CGACCGCGAG CGGCTGCTGG
ATCTTCTGCG GTGCATGGAC GCAGGCCGGC AACCAGATGG GGCGGCGCGA CAACTCCGAC
CCGACCGGCA TCGGCCAGAC GCTGAACTGG GCGTGGGCAT GGCCCGCGAA CCGGCGGATC
CTGTACAACC GCGCATCGTG CGACGTGAGC GGCAAGCCGT TCGATCCGAC CCGCACGCTG
ATCGGCTGGA ACGGCAGCGC GTGGAAGGGC CCCGACGTAC CGGACTTCAA GGCGGATGAA
CCACCTGAAA ACGGGATGGG GCCGTTCATC ATGAATCCGG AAGGCGTCGC GCGCTTCTTC
GCGCGCGCGG GGATGAACGA AGGTCCGTTC CCCGAGCACT ACGAGCCGTT CGAGACGCCG
CTTGCCGCGA ACCCGCTGCA CCCGAACAAC CCGCAGGCGC TGAACAATCC GGCCGCCCGC
GTGTTCCCGG GTGACCGCGC GTCGTTCGGC AAGGTGTCCG AGTTCCCGCA CGTCGCGACG
ACGTACCGGC TGACCGAGCA TTTCCACTAC TGGACCAAGC ATGCGCGGCT GAACTCGATC
ATCCAGCCCG AGCAATTCGT CGAGATCGGC GAGGACCTCG CGAAGGAAGT CGGCGTCGCG
CACGGCGATC GCGTGAAGGT GTCGTCCAAG CGAGGCTACA TCGTCGCGGT CGCACTCGTC
ACGAAGCGGA TCAAGCCACT GACGATCGAG GGCAAGAAGG TCCAGACGGT CGGCGTCCCG
TTGCACTGGG GCTTCAAGGG TCTGACGAAG CCCGGCTATC TCGCCAATAC CCTGACTCCG
TCCGTAGGCG ACGGCAACTC GTACACACCG GAATTCAAGT CGTTCCTGGT GAAGGTCGAA
AAGGCGTAA
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| Protein sequence | MAGLAPTFGR GAMTNHWVDI KNADVILVMG GNAAEAHPCG FKWVTEAKAH RKARLIVVDP
RFTRTASVAD YYAPIRTGTD IVFLGGVINY LLTNDKIQHE YVKNYTDFSF IVREDFAFND
GIYSGYDAEK HAYPDKSSWD YERGDDGFVK VDPTLQHPRC VYNLMKQHYA RYTPDMVQQT
CGTPKEKFLK VCEMLATTAV PGRAGTVLYA LGWTHHSIGS QMIRTGAMVQ LLLGNIGIAG
GGMNALRGHS NIQGLTDLGL MSNLLPGYMT LPMQAEQDFD GYLKKRTQQP LRPNQLSYWK
NYKAFHVSFM KSWWGDAATA ENNWGYDYLP KLDKQYDLLQ AIELMNEGKM TGYICQGFNP
LAAAPSKVKT AAGLAKLKWL VIMDPLATET SEFWKHHGDY NDVDASKIQT EVFRLPTTCF
AEEDGSLVSS SRVLQWHWKG AEPPGEAKSD LEIMSGLFLR MRKMYQKDGG KYPDPIVNLT
WPYANPESPT PAELAMEFNG RALADLPDPK DPTKTLVKKG EQLAAFAQLK DDGTTASGCW
IFCGAWTQAG NQMGRRDNSD PTGIGQTLNW AWAWPANRRI LYNRASCDVS GKPFDPTRTL
IGWNGSAWKG PDVPDFKADE PPENGMGPFI MNPEGVARFF ARAGMNEGPF PEHYEPFETP
LAANPLHPNN PQALNNPAAR VFPGDRASFG KVSEFPHVAT TYRLTEHFHY WTKHARLNSI
IQPEQFVEIG EDLAKEVGVA HGDRVKVSSK RGYIVAVALV TKRIKPLTIE GKKVQTVGVP
LHWGFKGLTK PGYLANTLTP SVGDGNSYTP EFKSFLVKVE KA
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