Gene Bamb_3364 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_3364 
Symbol 
ID4312224 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp159479 
End bp161947 
Gene Length2469 bp 
Protein Length822 aa 
Translation table11 
GC content70% 
IMG OID638151205 
Productglycosyl transferase, group 1 
Protein accessionYP_775252 
Protein GI115358114 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATCGCG ATCTGGCGGA ACACGCCATC CTGAACGTGG CCACGGCGGA TGCCGCCGTG 
GCCGAAGCCG GCGCCACCGC GCTGCGCCGG ACCGAAACGG CCGCGCCGGC GGGCGCACGC
GATGCGTCGC GTCCGCTACG CGTGGCGATC GTCCACGACT GGCTCGTCAC GTACGCGGGC
GCCGAGCGCG TGCTCGAACA GATCGTCGCG TGCTTTCCCG ACGCGGACCT GTTCAGCCTC
GTCGATTTTC TCGACGATCG CGCGTTCGTG CGCGGCAAGC CGGTGACGAC CTCGTTCATC
CAGAAACTGC CGTTCGCACG CACCAAGTAC CGCAGCTACC TGCCGCTGAT GCCGCTCGCG
ATCGAGCAGC TCGACGTGTC GGACTACGAC CTCGTGATCT CCAGCAGCCA TGCGGTCGCG
AAGGGCGTGC TGACCGGGCC GGACCAGATG CACATCAGCT ACGTGCACTC GCCGATCCGC
TATGCGTGGG ACCTGCAGCA CCAGTATCTG GAACAGTCGA ACCTCACGCA CGGGCCGAAA
TCGCTGCTCG CGCGGATGAT CCTGCATTAC ATCCGCAACT GGGACACGCG CACCGCGAAC
GCGGTGGACG GGTTCGTCGC GAACTCCGCG TTCATCGCGC GACGCATCCG CAAGGTGTAT
CACCGCGACG CGGCGGTGAT CTTCCCGCCG GTCGACGTCG ACGGCTTCTC GCTGAACGAG
GTGAAGGACG ATTTCTACCT GACCGCGTCG CGGATGGTGC CGTACAAGAA GATCGACCTG
ATCGTCGAGG CCTTCTCGCG CACGCCGGAG CGCAAGCTCG TCGTGATCGG CGACGGCCCG
GAGATGCAGA AGATCCGCGC GAAGGCCGGC CCGAACGTCG AGATCATGGG CTACCAGCCG
TTCGCGGTGC TGCACGACCG GATGCGCCGC GCGAAGGCGT TCGTGTTCGC GGCCGAGGAG
GATTTCGGGA TTTCGGTGGT CGAGGCGCAG GCGTGCGGCA CGCCCGTGAT CGCGTACGGC
AAGGGCGGGG CGCTCGAAAC CGTGCTCGAG CCGCGCTCGC ACGCGAACCC GACCGGCCTG
TTCTTCGACG AGCAGACGCC GCACGCGATC GTCGCGGCGG TCGACGATTT CGAGCGCGCG
CCGCAGCGTT TCACGCCGCA CGCGTGCCGC GCGAACGCGG AGCGCTTCTC CGCCGACACG
TTCCGCCGGC GTTTTCTCGA CTATGTGGAG GCCGCGCTGC CCGGCGCGAC CGCGCAGCGC
GGCAGCGCCG CGCCGATGCC GGCCGCGCAC GGCCCGGCGA CGCTGGTGCT GGACCAGAGC
GGCGTGCTCG GCGGCGCGGA GCTGTCGCTG CTGGAGATCA TGAAGCACAT GCGCGCGAAC
GCCGACGTGC TGCTGTTCGA CGACGGCCCG TTCCGTGCGG CGCTCGACGA GATCGGCGCG
CGCGTCGACG TGCTCGACCA GGGCGCGCTC GCCGGGGTGC GCAAGCAGGG TGGCGTGTCG
GTGGGCGCGT TGAAGCGACT CGCCGGGCTG GTGCGCGACG TCGCACGGCG CGCACGGCGC
GCCGAGGTGA TCTACGCGAA CACGCAGCGC GCGATGGTGG TCGCGGCGCT GGCCGGGCGG
CTCGCGCGCA AGCCGGTGGT GTGGCACCTG CGCGACATCG TCAGCGGCGA CCATTTCGGC
AGCAAGCAGC TGATGGCGAT CAAGTACTGC GCGCGGTTCG GCGTCACGCG GGTGATCGCG
AACTCGGACG CGTCCGCGCA GGCGTTCCGC GCGCTGACGG GCTTCACGCC GCAGCACGTC
GACGTCGTGT TCAACGGCAT TTCGGCCGAA CCGTTCGATG CGCTGGACCA TGCCAGCCAG
GCCGCGCTGC GCGCGCGCTT CGGGCTGCCC GAGCACGCAT GGCTGGTCGG CTCGTTCAGC
CGCCTCGCGC ACTGGAAAGG GCAGCATCTG CTGCTGGAGG CCGCCGCACG CCATCCCGAC
ATGCACGTGG TGCTGGTCGG CGCGCCGCTG TTCGGCGAGG ACGAATACGC GGCGCAGCTG
CACGAGATCG TCGCGCGTCA CGGGATGGGC GACCGCGTCC ACTTCCTCGG GTTCCAGCGC
GACGTGGCCG CGTGCATGAA GGCGGTCGAC GTGGTCGCGC ATACGTCGAT CACGCCCGAG
CCGTTCGGGC GCGTGATCGT CGAGGGGATG CTCGCGCGGC GGCCGGTGGT CGCGGCCCGC
GCGGGCGGGG TCGTCGAGAT CATCGAGGAC GAGGAAAACG GGCTGCTCTG CGAGCCGGGC
AACGCGGCCG CGCTGGCCGA TGCGCTGGGC CGGCTGAAGC ACGACACCGC GCTGCGCGAG
CGGCTCGTCG CGAGCGGGCG GGCGACCGCG GTGCGCCGGT TCGGCACCGA AACCTATGTG
GAGCGGGTCG AGAAGATTCT CGCGGATACG GCGAAGGCCG CGAAGGCCGC GAAGGCGAAG
AAGCGGTAG
 
Protein sequence
MNRDLAEHAI LNVATADAAV AEAGATALRR TETAAPAGAR DASRPLRVAI VHDWLVTYAG 
AERVLEQIVA CFPDADLFSL VDFLDDRAFV RGKPVTTSFI QKLPFARTKY RSYLPLMPLA
IEQLDVSDYD LVISSSHAVA KGVLTGPDQM HISYVHSPIR YAWDLQHQYL EQSNLTHGPK
SLLARMILHY IRNWDTRTAN AVDGFVANSA FIARRIRKVY HRDAAVIFPP VDVDGFSLNE
VKDDFYLTAS RMVPYKKIDL IVEAFSRTPE RKLVVIGDGP EMQKIRAKAG PNVEIMGYQP
FAVLHDRMRR AKAFVFAAEE DFGISVVEAQ ACGTPVIAYG KGGALETVLE PRSHANPTGL
FFDEQTPHAI VAAVDDFERA PQRFTPHACR ANAERFSADT FRRRFLDYVE AALPGATAQR
GSAAPMPAAH GPATLVLDQS GVLGGAELSL LEIMKHMRAN ADVLLFDDGP FRAALDEIGA
RVDVLDQGAL AGVRKQGGVS VGALKRLAGL VRDVARRARR AEVIYANTQR AMVVAALAGR
LARKPVVWHL RDIVSGDHFG SKQLMAIKYC ARFGVTRVIA NSDASAQAFR ALTGFTPQHV
DVVFNGISAE PFDALDHASQ AALRARFGLP EHAWLVGSFS RLAHWKGQHL LLEAAARHPD
MHVVLVGAPL FGEDEYAAQL HEIVARHGMG DRVHFLGFQR DVAACMKAVD VVAHTSITPE
PFGRVIVEGM LARRPVVAAR AGGVVEIIED EENGLLCEPG NAAALADALG RLKHDTALRE
RLVASGRATA VRRFGTETYV ERVEKILADT AKAAKAAKAK KR