| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3356 |
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| Symbol | |
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| ID | 4312358 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 149673 |
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| End bp | 150905 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638151198 |
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| Product | O-succinylhomoserine sulfhydrylase |
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| Protein accession | YP_775245 |
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| Protein GI | 115358107 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
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| TIGRFAM ID | [TIGR01325] O-succinylhomoserine sulfhydrylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGCG GCGCGCCCTT CGAATACGGA AAACGGAACA TGGACGACTC CCTCAATTTC
GACACGCTCG CCGTGCGCGC GGGCACGCTG CGCAGCAGCG ACTTCAACGA GCACTCGGAA
GCGCTGTTCC TCACGTCGAG CTTCTGCTTC AAGAGCGCGG CCGAGGCCGC CGAGCGCTTC
GCGAATTCGG AAGACTATTT CACCTATTCG CGCTTCACGA ACCCGACCGT CACCATGTTC
CAGGATCGTC TCGCCGCGCT CGAAGGCGGC GAGGCCTGCA TTGCGACGGC GTCGGGCATG
GCCGCGATCA TGTCGGTCGT GATGTCGGCA CTCCAGGCAG GCGATCACCT CGTCAGCTCG
CGCAGCCTGT TCGGCTCGAC GCTCGGGATG TTCTCGCAGA TCTTCAGTAA GTTCGGCATC
ACGACGACCT TCGTCGACCC GACCGACCTG AACGCGTGGC AGGAAGCGGT GCGGCCCGAA
ACGAAGATGT TCTTCCTCGA AACGCCGTCG AACCCGCTGA CCGAGCTCGC CGACATCGAG
GCGATCGGCA AGATCGCGAA GGCGGCGAAC GCGCTGTTCG TCGTCGACAA CTGTTTCTGC
AGCCCGGTGC TGCAGCAGCC GCTGAAGCTC GGCGCGGACG TCGTGATGCA CTCGGCGACG
AAGTTCCTCG ACGGGCAGGG CCGCGTGCTC GGCGGCGCGC TGGTCGGCTC GAAGGCATTC
ATCATGGGCA AGGTGTTCCC GTTCGTGCGC AGCGCGGGCC CGACGTTGTC GGCGTTCAAC
GCGTGGGTGC TGCTGAAGGG GATGGAGACG CTGTCGCTGC GCGTCGAGAA GCAGTCGGCG
AACGCGCTGG AAATCGCGCG CTGGCTCGAT TCGCATCCGG CCGTCGCGCG CGTCTTCTAT
CCGGGGCTCG AGTCGCACCC GCAGCATGAG CTCGCGAAGC GCCAGCAGAA GGCGGGCGGC
GCGATCGTCT CGTTCGAGCT GAAGGGCGAC ACGCCGGAGC AGCAGCGCGC GAACGCGTGG
CGCGTGATCG ACAGCACGAA GCTGATCTCG ATCACCGGCA ACCTCGGCGA CACGCGCACG
ACGATCACGC ATCCGGCGAC GACGACGCAC GCGCGCATCA CGCCGGAAGC GCGAGCGGCC
GCGGACATCA CCGAAGGGCT GCTCCGCCTC GCGGTCGGCC TGGAGGATGC GGGCGACCTG
CGCCGCGATC TCACGCGCGG CCTCGAGGGC TGA
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| Protein sequence | MIRGAPFEYG KRNMDDSLNF DTLAVRAGTL RSSDFNEHSE ALFLTSSFCF KSAAEAAERF
ANSEDYFTYS RFTNPTVTMF QDRLAALEGG EACIATASGM AAIMSVVMSA LQAGDHLVSS
RSLFGSTLGM FSQIFSKFGI TTTFVDPTDL NAWQEAVRPE TKMFFLETPS NPLTELADIE
AIGKIAKAAN ALFVVDNCFC SPVLQQPLKL GADVVMHSAT KFLDGQGRVL GGALVGSKAF
IMGKVFPFVR SAGPTLSAFN AWVLLKGMET LSLRVEKQSA NALEIARWLD SHPAVARVFY
PGLESHPQHE LAKRQQKAGG AIVSFELKGD TPEQQRANAW RVIDSTKLIS ITGNLGDTRT
TITHPATTTH ARITPEARAA ADITEGLLRL AVGLEDAGDL RRDLTRGLEG
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