| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3346 |
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| Symbol | truA |
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| ID | 4312348 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 139653 |
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| End bp | 140465 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638151188 |
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| Product | tRNA pseudouridine synthase A |
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| Protein accession | YP_775235 |
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| Protein GI | 115358097 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0101] Pseudouridylate synthase |
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| TIGRFAM ID | [TIGR00071] pseudouridylate synthase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.291019 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGGATCG CGCTGGGAGT CCAGTACGAC GGCGCGGCGT TCTGCGGCTG GCAGGCGCAG
CCGCACGGCA AGACCGTGCA GGACGCGCTC GAGCGCGCGC TCGGCGAATT CGCGTGCGTG
CCATTGCACA CGACGGTCGC GGGGCGCACC GACACGGGCG TGCACGGGCT CGGGCAGGTC
GTGCACTTCG ACACGGACCT CGACCGCACG GATTTCTCGT GGGTGCGCGG CACCAACGCG
TTCCTGCCGT CGACCGTTTC CGTGCAGTGG GCGAAACCGA TGCCGGAAAC GTTCCACGCG
CGTTTCGCGG CATTCGAACG CACCTATTAC TACGTGCTGT ACGTGCATCC CGTGCGCTCG
CCGATGCTGG CCGGCCGTGC CGGATGGATC CACACGCCGC TCGACGACGA CGCGATGCGC
GCCGCCGCCG CGCACCTGAT CGGCGAGCAT GACTTCTCGT CGTTCCGGTC GTCGGAATGC
CAGTCGAAGA CGCCGGTCAA ACACCTGTAC CAGATCGACG TGCGGCGCTC GGGCCACTTC
ATTCATTTCC GCTTCCGCGC GAACGCGTTC CTGCACCACA TGGTGCGCAA CCTGATGGGC
TGCCTCGTCG CGGTCGGGCG CGGCCGCTAT CCGGCGGACT GGCTCGCCGA CGTGCTGGCC
GGGCGCGACC GCACGCTCGC CGCGCCCACG TTCATGGCCG ACGGGCTGTA TCTTGCCCAT
GTCGGCTACC CGGCGGAATT CGCCGTCCCG CCCGCGCAAC TCGGCAGCGT GCCGTGGAGC
AGCGTCTGGG CCGATCTGGA CCTACCATCA TGA
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| Protein sequence | MRIALGVQYD GAAFCGWQAQ PHGKTVQDAL ERALGEFACV PLHTTVAGRT DTGVHGLGQV
VHFDTDLDRT DFSWVRGTNA FLPSTVSVQW AKPMPETFHA RFAAFERTYY YVLYVHPVRS
PMLAGRAGWI HTPLDDDAMR AAAAHLIGEH DFSSFRSSEC QSKTPVKHLY QIDVRRSGHF
IHFRFRANAF LHHMVRNLMG CLVAVGRGRY PADWLADVLA GRDRTLAAPT FMADGLYLAH
VGYPAEFAVP PAQLGSVPWS SVWADLDLPS
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