| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3343 |
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| Symbol | |
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| ID | 4312345 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 134792 |
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| End bp | 135859 |
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| Gene Length | 1068 bp |
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| Protein Length | 355 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638151185 |
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| Product | 3-isopropylmalate dehydrogenase |
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| Protein accession | YP_775232 |
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| Protein GI | 115358094 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
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| TIGRFAM ID | [TIGR00169] 3-isopropylmalate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATTG CAGTGCTGCC CGGCGACGGC ATCGGTCCGG AAATCGTCAA CGAAGCCGTC
AAGGTGCTGA ACGCCCTCGA CGAACAGTTC GAACTCGAGC AGGCGCCGGT CGGCGGCGCG
GGCTACGAGG CGAGCGGTCA TCCGCTGCCG GACGCGACGC TGAAACTCGC GAAGGAAGCG
GACGCAATCC TGTTCGGTGC GGTCGGCGAC TGGAAGTACG ACTCGCTCGA GCGCGCGCTG
CGCCCCGAGC AGGCGATCCT CGGGCTGCGC AAGCACCTCG AGCTGTTCGC AAACTTCCGC
CCGGCGATCT GCTATCCGCA GCTTGTCGAT GCGTCGCCGC TGAAGCCGGA ACTGGTCGCG
GGCCTCGACA TCCTGATCGT GCGCGAACTG AACGGCGACA TCTACTTCGG CCAGCCGCGC
GGCGTGCGCG CGGCGCCGGA CGGCCCGTTC GCCGGCGCGC GCGAAGGCTT CGACACGATG
CGCTACTCGG AGCCGGAAGT GCGCCGCATC GCGCACGTCG CGTTCCAGGC CGCGCAAAAG
CGCGCGAAGA AGCTGCTGTC GGTCGACAAG TCGAACGTGC TTGAAACGTC GCAGTTCTGG
CGCGACGTCA TGATCGACGT GTCGAAGGAA TACGCGGACG TCGAGCTGTC GCACATGTAC
GTCGACAACG CGGCGATGCA GCTCGCGAAG GCGCCGAAGC AGTTCGACGT GATCGTGACC
GGCAACATGT TCGGCGACAT CCTGTCGGAT GAAGCGTCGA TGCTGACGGG CTCGATCGGC
ATGCTGCCGT CGGCGTCGCT CGACAAGAAC AACAAGGGTC TGTACGAGCC GTCGCACGGT
TCGGCGCCGG ACATCGCGGG CAAGGGCATC GCGAACCCGC TGGCGACGAT CCTGTCGGCC
GCGATGATGC TGCGCTACTC GCTGAATCGC GCCGAGCAGG CCGATCGCAT CGAGCGCGCG
GTGAAAACGG TGCTCGAACA AGGCTATCGC ACCGGTGACG TCGCGACGCC GGGCTGCAAG
CAGGTCGGCA CGGCGGCGAT GGGCGATGCG GTCGTCGCCG CGCTGTAA
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| Protein sequence | MKIAVLPGDG IGPEIVNEAV KVLNALDEQF ELEQAPVGGA GYEASGHPLP DATLKLAKEA
DAILFGAVGD WKYDSLERAL RPEQAILGLR KHLELFANFR PAICYPQLVD ASPLKPELVA
GLDILIVREL NGDIYFGQPR GVRAAPDGPF AGAREGFDTM RYSEPEVRRI AHVAFQAAQK
RAKKLLSVDK SNVLETSQFW RDVMIDVSKE YADVELSHMY VDNAAMQLAK APKQFDVIVT
GNMFGDILSD EASMLTGSIG MLPSASLDKN NKGLYEPSHG SAPDIAGKGI ANPLATILSA
AMMLRYSLNR AEQADRIERA VKTVLEQGYR TGDVATPGCK QVGTAAMGDA VVAAL
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