| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3333 |
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| Symbol | |
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| ID | 4312335 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 126199 |
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| End bp | 127080 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638151175 |
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| Product | catechol 1,2-dioxygenase |
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| Protein accession | YP_775222 |
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| Protein GI | 115358084 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3485] Protocatechuate 3,4-dioxygenase beta subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.12775 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.964929 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCAACA TCAACGAAGA CACCATCACG CAAGCCGTTA TCGCTTCGTT TTCCGACTGC
AAGGACGCAA GACTGAGAAC GGTGATGACG AGCCTTGTTC AACATCTTCA TGCTTTTGCT
CGCGACGTCC ATCTCACCGA GGACGAGTGG TTCAAGGCAA TCAGGTTTTT GACGGAGGTC
GGCGATATCA CCGACGACAA ACGGCAGGAG TTCATTCTGC TGTCCGACAC GCTCGGCCTT
TCGATGTTGG TCATGTCGCA GAACAATCGG AAGCCATCCA ACTGTACGGA AGCAACCGTG
TTCGGGCCGT TCTATGTTGA GGGGGCGCCC TTTTACAACA ATGGCGATGA CATCTCCAAC
GGTGCAAAGG GGGCGCCCTG CTATGTGAGC GGGCAGGTGC GCGGCGCGGG CGGAGAAGTC
ATTCCCGACG CGCAAATCGA CGTATGGCAA TCGGACGAAG ACGGCTTCTA CGACGTCCAG
AACCTGGACG AGGCGGGCAA CGCTATCCAT CGCGCTCGAG GTCGGCTGAA GGGCGATGCA
GAAGGTTTCT TCAACTTTCG CTCGATTCTC GCCGAGGCGT ACCCGATCCC GCACGATGGT
CCCGTTGGTC GCATGTTGGC GGCCGTCGGC CGGCACCCGT GGCGGCCCGC ACATCTGCAT
TTCATGATTG AAGCGCCGGG ATACGAGACG CTCATCACTC ATGTCTTCCG TGATGGCGAC
AAGTACCTCG ATTCGGACGT GGTGTTCGGT GTGCGCTCGA CGTTGATTGC CGAGTGGAAG
CGTCACGAGC CGGGAGTGGC GCCGGACGGC CGGGAAATCG ACGTTCCGTG GTACTCGCTC
GAGTACGACT TCGTGCTTAA CCCTTCGGAG GCGCACGCAT GA
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| Protein sequence | MRNINEDTIT QAVIASFSDC KDARLRTVMT SLVQHLHAFA RDVHLTEDEW FKAIRFLTEV
GDITDDKRQE FILLSDTLGL SMLVMSQNNR KPSNCTEATV FGPFYVEGAP FYNNGDDISN
GAKGAPCYVS GQVRGAGGEV IPDAQIDVWQ SDEDGFYDVQ NLDEAGNAIH RARGRLKGDA
EGFFNFRSIL AEAYPIPHDG PVGRMLAAVG RHPWRPAHLH FMIEAPGYET LITHVFRDGD
KYLDSDVVFG VRSTLIAEWK RHEPGVAPDG REIDVPWYSL EYDFVLNPSE AHA
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