| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3332 |
|---|
| Symbol | |
|---|
| ID | 4312334 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008391 |
|---|
| Strand | - |
|---|
| Start bp | 124976 |
|---|
| End bp | 125899 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 638151174 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_775221 |
|---|
| Protein GI | 115358083 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.0789426 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACCGCT GGACCCAGCT GCAGTTGTTT GTGCTTACTG CCGACCTAGG CAGCTTGTCA
AAGGCCGCCG AGCAGCTCGA TATGTCAAAT GCAGCAGCTA GCCGCACGCT CAGTTCGTTG
GAAGAGCGCC TCGGTGCCAG ATTGATAGAA CGGACAACGC GGCGAATGTG GCTGACAGAC
GCAGGACGCG AATATCACCG CCGATGCACC GCCGTGATCG CGGAACTGGC AGAAGCGGAC
GCCATCGCTT CCGAGGAGGT CGTTAATCCA CGCGGCGTAC TTCGGGTGAC CAGTTCTGTA
TCTTTCGCAA TGATGCACCT CGCACCAGCA CTTCCCGAAT TCCTGAAGCG CTATCCCAAC
CTGACGGTTC AGATCACCGC AACCAATCAA TATCAGAACT TCATCGAATC CGGGATAGAT
ATCGCCATTC GCACGAAGGA GCATGAGGGT GATTCGTGCA TCACGATCCG CAGGCTTGCC
GAGACGCGAC GCGTGCTCGC CGCATCGCCC GCCTATCTCG CCACCCATGG CCGGCCTCAG
AAGCCAGAGG ACCTGGCGCA GCACAACATG CTCGTGTACA ACCTTGCCGT CGACCCGTAT
CTGCTACACC TGCGTCGGGG AAAGGAGGAG CGCAATATCG CCATCGCCAG TGCTCTGGAC
TCGAATGAAG GCCAGGTCAT CGTGGCGGCC GGACGTGCGG GACTGGGAAT TGTCGTGCAG
CCGCTCTACA TCATCCACGA CGATATCGTG TCGGGGCGTC TCGTTCCTGT GTTGGAAGAC
TGGCAACTGC CACGTCTGAC GATTAACCTG GCGTATCAAA GCCGGCGTTA CCAGCCGGCG
AAAATTCGAG TTTTCACTGA CTTCCTTATC GAGCGCGTGA AGAACCTCAA TCTCGAAGAA
CGCTGGATGA CCTTTGCGGC CTGA
|
|---|
| Protein sequence | MDRWTQLQLF VLTADLGSLS KAAEQLDMSN AAASRTLSSL EERLGARLIE RTTRRMWLTD
AGREYHRRCT AVIAELAEAD AIASEEVVNP RGVLRVTSSV SFAMMHLAPA LPEFLKRYPN
LTVQITATNQ YQNFIESGID IAIRTKEHEG DSCITIRRLA ETRRVLAASP AYLATHGRPQ
KPEDLAQHNM LVYNLAVDPY LLHLRRGKEE RNIAIASALD SNEGQVIVAA GRAGLGIVVQ
PLYIIHDDIV SGRLVPVLED WQLPRLTINL AYQSRRYQPA KIRVFTDFLI ERVKNLNLEE
RWMTFAA
|
|---|
| |