Gene Bamb_3319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_3319 
Symbol 
ID4312321 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp109739 
End bp110992 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content70% 
IMG OID638151161 
Producthypothetical protein 
Protein accessionYP_775208 
Protein GI115358070 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.733251 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCTGA CGATCGACGA TTTGCCGGCC GCGATCCGCG CGGCGAAAAG GGCGCTGCGC 
GCCGACCTGC CCGGATACGC GGCCACATTC CGCGAGCTGG AGGGCGATAT CGCGCGGCAG
GTCGATGCGA TCCGCCGGGC ACACGCGCAC GGCCATGACG TGATTCCGGT GCTGCGGTTC
GCGGATATCG CGAACGGCAC CGTCGATCCA CAGACGATCG CCGCGATCCG CACGCACGGT
GCGGCGGTGA TCCGTGGCGT GTTCGACGCG GCGCAGGCGC GTGACTGGAA TGACGAGATC
GGCGCGTACC TGGACGCGAA CCGCTTCGCC GAGCGGCTGC ATGCGCGTGC CGAGGACCGC
TACTTTGGCA ACCTCGCGTC GGGCAAGCCG CAGATCTACG GCGTCTACTG GTCGAAGCCG
CAGGTGGCCG CGCGCCAGTC GCCGGCGCTC ACGCAGGCAC GCGTGTTCAT GAACCGCCTG
TGGCGGCATG CGGACGGCCA GCGCACGCAC TTCGATCCCG ACCGGGTGCC GGCCTACGCG
GACCGGATTC GCCGCCGGCC GCCGGGCTCC ACGTCGCTCG GGCTGTCGCC GCATGTCGAC
GGCGGCTCGG TCGAACGCTG GCTCGGCGCG AATTTCCGGC AGGTCTATCG CCACGTACTG
GGCGGCCAGT GGCGCGATTA CGACCCGTTC GACGCCGCGT TTCGTCCCGA TGTCGAGGAG
ATTCCGTCGC CGGCCGTATG CTCGATGTTC CGCACGTTCC AGGGCTGGAC CGCGCTGACG
CCGCAGGGGC CCGGCGACGG CACGCTGCAG CTGATTCCGG TGGCGAACGC GATGGCGTAC
GTCGTGCTGC GCGCGCTGCA GGACGACGTC GCCGACGACA ACCTGTGCGG CGCGCGTCCG
GGCCGCGCGC TGTCGATCCT GCCCGAATGG CATGCGCTGC TGCTCGACGC GCTGGTGCCG
ATTCCGCACA TGGAGCCGGG CGATGCCGTG TTCTGGCACG GCGACGTCGT GCACGCGGTC
GAGGATGCGC ATCGCGGCAG CGGCGACAGC AACGTGATGT ACATCGCGGC CGCGCCCGGC
TGCGCGAAGA ACGACGCGTA CCTGCAGCGC CAGCGGCTCG CGTTCCTGCG TGGCGACAGC
CCGCCGGATT TCCCGGCCGA TCATTTCGAG GTGGAATTCG ACGGACGGGG TGGCGAGGGC
GACCTTACGG CGCTTGGCCG TGCGCAAATG GGGTTCGGGC CGCTCGCTGC ATGA
 
Protein sequence
MHLTIDDLPA AIRAAKRALR ADLPGYAATF RELEGDIARQ VDAIRRAHAH GHDVIPVLRF 
ADIANGTVDP QTIAAIRTHG AAVIRGVFDA AQARDWNDEI GAYLDANRFA ERLHARAEDR
YFGNLASGKP QIYGVYWSKP QVAARQSPAL TQARVFMNRL WRHADGQRTH FDPDRVPAYA
DRIRRRPPGS TSLGLSPHVD GGSVERWLGA NFRQVYRHVL GGQWRDYDPF DAAFRPDVEE
IPSPAVCSMF RTFQGWTALT PQGPGDGTLQ LIPVANAMAY VVLRALQDDV ADDNLCGARP
GRALSILPEW HALLLDALVP IPHMEPGDAV FWHGDVVHAV EDAHRGSGDS NVMYIAAAPG
CAKNDAYLQR QRLAFLRGDS PPDFPADHFE VEFDGRGGEG DLTALGRAQM GFGPLAA