Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_3314 |
Symbol | sdhB |
ID | 4312316 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | + |
Start bp | 105745 |
End bp | 106446 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638151156 |
Product | succinate dehydrogenase iron-sulfur subunit |
Protein accession | YP_775203 |
Protein GI | 115358065 |
COG category | [C] Energy production and conversion |
COG ID | [COG0479] Succinate dehydrogenase/fumarate reductase, Fe-S protein subunit |
TIGRFAM ID | [TIGR00384] succinate dehydrogenase and fumarate reductase iron-sulfur protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.964929 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCAAAAC GCATTTTTGA AGTCTACCGC TACGATCCGG ACAAGGACGC GGCGCCGCGC ATGCAGACGT ACGAGCTCGA GATCCAGCAT GAGCGCATGC TGCTCGACGC ACTGGTCAAG CTGAAGGCAG TGGACGAGAC GCTGTCGTTC CGCCGTTCGT GCCGTGAAGG CGTGTGCGGT TCGGACGCGA TGAACATCAA CGGCAAGAAC GGTCTCGCGT GCCTGACGAA CCTGAACGAC CTGCCGCAGA AGATCGTGCT GCGCCCGCTG CCGGGCCTGC CCGTCGTGCG CGACCTGATC GTCGACATGA CGCACTTCTT CAACCAGTAT CACTCGATCA AGCCGTACCT GATCAACGAC GCGCCGCCGC CGGAGAAGGA ACGCCTCCAG TCGCCGGAAG AGCGCGACGA GCTCGACGGC GTGTACGAGT GCATTCTGTG CGCGAGCTGC TCGACGTCGT GCCCGAGCTT CTGGTGGAAC CCGGACAAGT TCGTCGGCCC GGCCGGCCTG CTGCAGGCTT ACCGCTTCAT CGCGGATAGT CGCGACACCG CCACCGGCGA GCGTCTCGAC AACCTGGAAG ACCCGTACCG TCTGTTCCGT TGCCACACGA TCATGAACTG CGTCGACGTT TGCCCGAAGG GCCTGAACCC GACGAAGGCG ATCGGCAAGA TCAAGGAACT GATGGTTCGC CGCGCGGTTT AA
|
Protein sequence | MAKRIFEVYR YDPDKDAAPR MQTYELEIQH ERMLLDALVK LKAVDETLSF RRSCREGVCG SDAMNINGKN GLACLTNLND LPQKIVLRPL PGLPVVRDLI VDMTHFFNQY HSIKPYLIND APPPEKERLQ SPEERDELDG VYECILCASC STSCPSFWWN PDKFVGPAGL LQAYRFIADS RDTATGERLD NLEDPYRLFR CHTIMNCVDV CPKGLNPTKA IGKIKELMVR RAV
|
| |