Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_3308 |
Symbol | |
ID | 4312310 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | - |
Start bp | 99695 |
End bp | 100699 |
Gene Length | 1005 bp |
Protein Length | 334 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 638151150 |
Product | HpcH/HpaI aldolase |
Protein accession | YP_775197 |
Protein GI | 115358059 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2301] Citrate lyase beta subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.747689 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGCGC TCACTCCTGC ACAAGTGCTG TACGACGGGG CGTCGCCGCC CGCGATCCTG CCCTGCTGCG ATCACTACGC GGGCAGCGAG AAGCTGATGC GCAAGTCGCT CGCGCTCCAG GCCGAACTCG GCCCCGTGTT CGACATCACG CTCGACTGCG AGGACGGCGC GGCCGTCGGC CAGGAAGCCG CGCACGCGCA GCTCGTCGCC GAGCTGCTCG GCAGCGCCGA GAACCGCTTC GGGCGGGTCG GCGTCCGCAT CCACGACTTT TCCCATCCCC ATTGGCGCGA CGACGTGCGC ATCGTGCTGC GCGCCGCGCG CGCACCGGCC TACGTCACGC TGCCGAAGAT CGCGAGCGCC GCCGACGCGG CCGAGATGGT CGCGTTCATC GAAGGCACAC GCCGCGAGCT CGGCCTCGCG CAGCCGATTC CCGTCGACGT GCTGGTCGAG ACGCACGGTG CGCTCGCGCA GGCGGCCGCC CTCGCCGCGC TGCCGCTCGT CGGCACGCTG AGCTTCGGGC TGATGGACTT CGTGTCCGCC CATCACGGCG CGATTCCCGA TGCGGCGATG CGCTCGCCCG GCCAGTTCGA CCACCCGCTC GTGCGCCGCG CGAAGCTGGA GATCGCCGCG GCCTGCCACG CGCACGGCAA GACACCGTCA CACAATGTCA CAACCGAGGT GCGCGACATG GCGATCGTCG CCGGCGACGC CCTCCGCGCA CGCGACGAAT TCGCATTCAC GCGGATGTGG AGCATCCATC CCGCGCAGAT CCGCCCGATC GTCGACGCAT TCGCGCCGCG CACCGATGAA GTCGCACTGG CCGCCGAGAT CCTGCTGGCC GCGCAGGCCG CCGACTGGGG CCCGACGCGC CACGGCGATA CGCTGCACGA CCGCGCGAGC TACCGCTATT ACTGGTCGGT GCTGCGCCGC GCGCGCGCGA CCGGCCAGCC GGTGCCGGCC GAGGCCGCAC CGCTGTTCGG CCCAGCCGCC GGAGACGCGC GGTGA
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Protein sequence | MSALTPAQVL YDGASPPAIL PCCDHYAGSE KLMRKSLALQ AELGPVFDIT LDCEDGAAVG QEAAHAQLVA ELLGSAENRF GRVGVRIHDF SHPHWRDDVR IVLRAARAPA YVTLPKIASA ADAAEMVAFI EGTRRELGLA QPIPVDVLVE THGALAQAAA LAALPLVGTL SFGLMDFVSA HHGAIPDAAM RSPGQFDHPL VRRAKLEIAA ACHAHGKTPS HNVTTEVRDM AIVAGDALRA RDEFAFTRMW SIHPAQIRPI VDAFAPRTDE VALAAEILLA AQAADWGPTR HGDTLHDRAS YRYYWSVLRR ARATGQPVPA EAAPLFGPAA GDAR
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