| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3305 |
|---|
| Symbol | acnA |
|---|
| ID | 4312307 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008391 |
|---|
| Strand | - |
|---|
| Start bp | 94709 |
|---|
| End bp | 97426 |
|---|
| Gene Length | 2718 bp |
|---|
| Protein Length | 905 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 638151147 |
|---|
| Product | aconitate hydratase |
|---|
| Protein accession | YP_775194 |
|---|
| Protein GI | 115358056 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1048] Aconitase A |
|---|
| TIGRFAM ID | [TIGR01341] aconitate hydratase 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.877438 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCCACA ATCTCCACAA GACCCTCCAG GAATTCGACA GCGGTTCCGG CAAAGGCAAG
TTCTACTCGC TGCCGCAGCT CGGCAAGGAA CTGAAGACGA AGATCGAGCG CCTGCCGGTG
TCGATCCGTA TCGTGCTCGA GTCCGTGCTG CGCAACTACG ACGGCAAGAA GATCACCGAG
GAACACATCG AGCAGCTGGC GAACTGGAAG CCGACCGCGA AGCGCGTCGA CGAGATTCCG
TTCGTGGTGT CGCGCGTCGT GCTGCAGGAC TTCACGGGCG TCCCGCTGCT CGCCGACATC
GCGGCCATGC GCGGCGTCGC CGAGCGTTCG GGCAAGAACC CGAAGAAGAT CGAGCCGCTG
GTGCCGGTCG ATCTCGTCGT CGACCACTCG GTCCAGATCG ACTACTTCCG CCAGAAGGAC
GCGCTCGACC TGAACATGAA GCTGGAATTC CAGCGCAACA ACGAACGCTA CCAGTTCATG
AAGTGGGGCA TGCAGGCGTT CGACACGTTC AAGGTCGTGC CGCCGGGCGT CGGCATCGTC
CACCAGGTGA ACCTCGAGTA TCTCGCGCGC GGCGTCCACA AGAAGGCGAA CGGCGGCGAC
ACCGTGTACT ACCCGGACAC CCTCGTCGGC ACGGACAGCC ACACGACGAT GATCAACGGC
ATCGGCGTGG TCGGCTGGGG CGTGGGCGGC ATCGAGGCCG AAGCCGGCAT GCTCGGCCAG
CCGGTGTACT TCCTGACGCC GGACGTCGTC GGCGTCGAGC TGAAGGGCAA GCTGCGCGAA
GGCGTGACGG CCACCGACCT GGTGCTGACG ATCACCGAAA TGCTGCGCAA GGAGAAGGTC
GTCGGCAAGT TCGTCGAGTT CTTCGGCGAA GGCACGAAGT CGCTGTCGCT GCCGGACCGC
GCGACGATCG GCAACATGGC GCCGGAATAC GGCGCGACGA TGGGCTTCTT CCCGGTCGAC
GAAAAGACCA TCGACTACTT CGAAGGCACG GGCCGCACGA AGGCGGAAAT CGCCGCGTTC
GAGAACTACT TCAAGGCTCA GAACCTGTTC GGCATTCCGC AGGCCGGCGA CATCGACTAC
ACGAAGACGG TGACGCTCGA CCTGGCGACG GTCGCGCCGT CGCTGGCAGG CCCGAAGCGC
CCGCAGGACC GCATCGAGAT CGGCAACGTC AAGTCGACGT TCACCGACCT GTTCTCGAAG
CCGGTCGCGG AAAACGGCTT CGCGAAGAAG GCGGACGAAC TGAACACGCA GTACACGACG
AGCAACGGCG TCGACGTGAA GAACGGCGAC GTGCTGATCG CCGCGATCAC GTCGTGCACG
AACACGTCGA ACCCGAGCGT GCTGCTGGCT GCAGGCCTGC TCGCGAAGAA GGCGGTCGAG
GCCGGCCTCA CGGTCGATCC GAAGATCAAG ACCTCGCTCG CGCCGGGATC GCGCATCGTC
ACCGAGTACC TGACGAAGAC GGGCCTGCTG CCCTACCTGT CGAAGCTCGG CTTCGAAGTC
GCGGCCTATG GCTGCACGAC CTGTATCGGC AACGCGGGCG ACCTGACGCC GGAGCTGAAC
GAAGCGATCA CGAAGAACGA CATCGTCGCG GCAGCCGTGC TGTCGGGCAA CCGTAACTTC
GAAGCGCGTA TCCACCCGAA CATCCGCGCG AACTTCCTCG CGTCGCCGCC GCTCGTCGTC
GCCTACGCGA TCGCCGGCAA CATCACGCGC GACCTGATGA CCGAGCCGGT CGGCAAGGGC
AAGGACGGTT ACGACATCTA CCTCGGCGAC ATCTGGCCGA CGAGCGAGGA AATCCACGCG
CTGCTCAAGT TCGCGCTCGA CCCGAAGAAG TTCGAGGACA ACTACTCGAA GCTGACCAAG
AAGGGCGACC TGTGGAGCAA GATCGAGGGC GAAACGGGCC AGGTCTACGA CTGGCCGAAG
TCGACCTACA TCGCGGAGCC GCCGTTCTTC GGCAACGACT TCTCGATGGA GCCGGCCGAT
TCGATCCCGA CGGTCAAGGG CGCGCGCGCA CTGGGCATCT TCGGTGACTC GGTCACGACC
GACCACATCA GCCCGGCAGG CTCGATCAAG GAAGACTCGC CGGCAGGCAA GTGGCTGAAG
GAGAACGGCG TGCAGAAGGC CGACTTCAAC AGCTACGGCT CGCGCCGCGG CAACCACGAC
GTGATGATGC GCGGCACGTT CGCGAACGTC CGGATCAAGA ACCTGATGAT CCCGGTGAAG
GCAGACGGCT CGCGCGTCGA AGGCGGCCTG ACGATCCACC AGCCGAGCGG CGACCAGCTG
TCGATCTACG ACGCCGCGAT GCGCTATGTC GACGCCGACA CGCCGACCGT CGTGTTCGCG
GGCGAAGAGT ACGGCACGGG CTCGTCGCGC GACTGGGCCG CGAAGGGCAC GCAACTGCTC
GGCGTGAAGG CCGTGATCGC ACGCAGCTTC GAGCGGATCC ACCGCTCGAA CCTGGTCGGC
ATGGGCGTGC TGCCGCTGCA GTTCAAGGGT GCGGACAGCG TCCAGTCGCT CGGCATCACC
GGCGAAGAGA CCTACGACAT CGAAGGCCTC GGCGACGACT TCAAGCCGCA GCAGGACGTC
ACGCTCGTGA TCCACCGCAA GAATGGCGAA ACGCAGCGCG TGCCGGTGCT GCTGCGCATC
GATACGCCGA TCGAAGTCGA CTACTACAAG CACGGCGGTA TCCTGCCGTT CGTGCTGCGC
TCGCTGCTGG CAGCGTAA
|
|---|
| Protein sequence | MAHNLHKTLQ EFDSGSGKGK FYSLPQLGKE LKTKIERLPV SIRIVLESVL RNYDGKKITE
EHIEQLANWK PTAKRVDEIP FVVSRVVLQD FTGVPLLADI AAMRGVAERS GKNPKKIEPL
VPVDLVVDHS VQIDYFRQKD ALDLNMKLEF QRNNERYQFM KWGMQAFDTF KVVPPGVGIV
HQVNLEYLAR GVHKKANGGD TVYYPDTLVG TDSHTTMING IGVVGWGVGG IEAEAGMLGQ
PVYFLTPDVV GVELKGKLRE GVTATDLVLT ITEMLRKEKV VGKFVEFFGE GTKSLSLPDR
ATIGNMAPEY GATMGFFPVD EKTIDYFEGT GRTKAEIAAF ENYFKAQNLF GIPQAGDIDY
TKTVTLDLAT VAPSLAGPKR PQDRIEIGNV KSTFTDLFSK PVAENGFAKK ADELNTQYTT
SNGVDVKNGD VLIAAITSCT NTSNPSVLLA AGLLAKKAVE AGLTVDPKIK TSLAPGSRIV
TEYLTKTGLL PYLSKLGFEV AAYGCTTCIG NAGDLTPELN EAITKNDIVA AAVLSGNRNF
EARIHPNIRA NFLASPPLVV AYAIAGNITR DLMTEPVGKG KDGYDIYLGD IWPTSEEIHA
LLKFALDPKK FEDNYSKLTK KGDLWSKIEG ETGQVYDWPK STYIAEPPFF GNDFSMEPAD
SIPTVKGARA LGIFGDSVTT DHISPAGSIK EDSPAGKWLK ENGVQKADFN SYGSRRGNHD
VMMRGTFANV RIKNLMIPVK ADGSRVEGGL TIHQPSGDQL SIYDAAMRYV DADTPTVVFA
GEEYGTGSSR DWAAKGTQLL GVKAVIARSF ERIHRSNLVG MGVLPLQFKG ADSVQSLGIT
GEETYDIEGL GDDFKPQQDV TLVIHRKNGE TQRVPVLLRI DTPIEVDYYK HGGILPFVLR
SLLAA
|
|---|
| |