Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_3300 |
Symbol | |
ID | 4312302 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | + |
Start bp | 89371 |
End bp | 90864 |
Gene Length | 1494 bp |
Protein Length | 497 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 638151142 |
Product | major facilitator transporter |
Protein accession | YP_775189 |
Protein GI | 115358051 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.471538 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAACCGGT TTCACCGCAT GGCATGCGCC GCCGCGCCGC TCAATTCCGC GACGCCGCGC GTCGCTCGTC AGCCGAGCCT CATCTTGTCC GAATTCGCTT CCTCCGCCGG CGCCCGGGAG CCGGCCGTCA ACTGGCGCGC GATGTCCGCC GTGCTGCTGG CCGTCGCGCT CGCGACGCTC GACACCGCGA TCGCGAACAC CGCGCTGCCC GCGATCGCCG CCGACCTGCA TGCGTCGCCG GCCGCATCGG TGTGGATCAT CAACGCCTAC CAGCTCGCGA TGGTCGCGAC GCTGCTGCCG TTCGCGTCGC TCGGCGACAT CGTCGGCCAC AAGCGCGTGT ATGTCGCGGG CCTCGCGGTG TTTACGCTCG CGTCGCTCGG CTGCTCGCTC GCGTCGACGC TGCCGCAGCT GACGGCGGCG CGGATCGTGC AGGGCTTCGG CGCGAGCGCG ATCATGAGCG TGAACGTCGC GCTGATCCGC AACCTGTTTC CCGCGCACCG GCTCGGGCGC GGCGTCGGCT TCAACGCGCT CGTCGTCGGC GTGTCGTTCG CGGTGGGGCC GACGATCGCG TCGTTGATCC TGTCGGTGGC CGCCTGGCCG TGGCTGTTCG CGGTGAACGT GCCGCTCGGC GTGCTCGCGC TTGCCGTCGC GATTCCGTCG CTGCCGCAGT CGGCGCGCGG CAAGCATGTG TTCGATCCGC TCGCCGCGCT GTTCAATGTG ATCACGTTCG CGTCGCTGAT CTTCGCGCTC GGCGAATTCG CGCAGCGCGG GCCGCTGTCC GTCGTGCTCG CGGCGGCCGC GGTCGCGCTC ACGTTCGGCT GGCTGCTAAT CCGCCGCCAG GCCGGACACC CGGCGCCGAT GCTGCCGGTC GACCTGTTCC GCCGGCCGGT GTTCACGCTG TCCGCGCTGA CGGCCGTATG CGCGTTTGCC GCGCAGGGGC TTGCGTTCGT ATCGCTGCCG TTCTACTTCG AAACCGTCCT GCATCGCAGC GCGGTGGAGA CCGGCTTCCT GATGACACCG TGGTCGGCGG TCGTCGCGCT CGCCGCGCCG ATCGCGGGCC GGCTGTCCGA CCGTTATCCG CCCGGCTTGC TCGGCGCGAT CGGCCTCGCC TTGCTGAGCG CGGGGATGGT CGCGCTCGCC GCGCTGCCGG CCGCGCCGAA CGTCTTCGAC ATCGGCTGGC GGATGATGCT GTGCGGCGCG GGCTTCGGCT TCTTCCAGTC GCCGAACCTG AAGGCGCTGA TGTCCAGCGC GCCGCCCGAG CGCAGTGGCG GCGCGAGCGG GATCATCGCG ACCGCGCGGC TGATCGGGCA GGCGACCGGC GCGGCGCTCG TCGCGCTGTC GTTCGGCGTC GCCGGACGTC ACGGGCCGAC GCTCGCGCTG ATGCTCGGTG CAGGCTTTGC CGGCGCCGCG AGCGTCGCGA GCGGATTGCG GCTCTTCGCG CCGTCGCATC GCGTCGGCGC GCCGGTGCCG GTGAAGGAGC GGGCGACGGA GTAG
|
Protein sequence | MNRFHRMACA AAPLNSATPR VARQPSLILS EFASSAGARE PAVNWRAMSA VLLAVALATL DTAIANTALP AIAADLHASP AASVWIINAY QLAMVATLLP FASLGDIVGH KRVYVAGLAV FTLASLGCSL ASTLPQLTAA RIVQGFGASA IMSVNVALIR NLFPAHRLGR GVGFNALVVG VSFAVGPTIA SLILSVAAWP WLFAVNVPLG VLALAVAIPS LPQSARGKHV FDPLAALFNV ITFASLIFAL GEFAQRGPLS VVLAAAAVAL TFGWLLIRRQ AGHPAPMLPV DLFRRPVFTL SALTAVCAFA AQGLAFVSLP FYFETVLHRS AVETGFLMTP WSAVVALAAP IAGRLSDRYP PGLLGAIGLA LLSAGMVALA ALPAAPNVFD IGWRMMLCGA GFGFFQSPNL KALMSSAPPE RSGGASGIIA TARLIGQATG AALVALSFGV AGRHGPTLAL MLGAGFAGAA SVASGLRLFA PSHRVGAPVP VKERATE
|
| |