| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3298 |
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| Symbol | |
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| ID | 4312300 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | + |
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| Start bp | 87105 |
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| End bp | 88367 |
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| Gene Length | 1263 bp |
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| Protein Length | 420 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638151140 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_775187 |
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| Protein GI | 115358049 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1176] ABC-type spermidine/putrescine transport system, permease component I |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.753859 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGATCG CTCCTTCCTC GCCGTCGACA GCCGCGCTCA AGCGCGAACT GAAGGCCGCC
GAGGCCCGCA AGCGCACGAT GGCGCTGCTG CTGGTCGCGC CGCTCGCGAT CTTCCTGCTG
CTCATCTTCG TCGTGCCGAT CGGCACGCTG CTTACGCGCG CGGTGCAGAA CCCCGAGATC
GCGACCGCGC TGCCGAAGAC GGTCGCCGCG CTGTCGGGCT GGGACCGCAA GGCGCCGCCC
GCCGACGCCG CGTACGTCGC GCTCGCGGCC GACATGACGA AGGTCGCCGA CAGCGAGGCG
ATGGGCGCGC TCGCGCGGCG CCTGAACACC GAGATTCCCG GCTACCGCTC GCTCGTCGCG
AAGACGGCGC GTGCGATGCC GCTGAAGGGC GACAACGATG CCGTCGCGGC GCTGACGCCC
GCGCAAACGC GCGCGAAACT GCTCGACCTC GATGCGCGCT GGGGCGACGC CGCGTACTGG
CAGGCGATCG CGAAGAACGG CAGCCAGGTG TCGCCGTTCT ACCTGCTCGC CGCACTCGAC
CACAAGCAGG ACGGCTTCGG CCGGATCGTG CAGGCCGATC CCGACCAGTC GATCTATCTG
TCGATCTTCG GCCGCACGTT CGTGATCGGC GTCGCGGTCA CGCTGTTCGC GCTGCTGCTC
GGCTATCCGC TCGCCTACTG GATCTCGACG CTGTCGGATC GGCGCGCGAA CCTCGTGATG
ATCCTGGTGC TGATTCCGTT CTGGACGTCG GTGCTGGTGC GCGTGGCCGC GTGGATCGTG
CTGCTGCAAA GCGAGGGGCT GATCAACACG GCGCTGATCG GCAGCGGGCT GATCTCGCAT
CCGCTGGCGC TGCTGTTCAA TCGCGTCGGC GTGTACATCT CGATGACGCA CATCCTGCTG
CCGTTCATGA TCCTGCCGCT CTACAGCGTG ATGAAGTCGA TCCCGCCGAC CTACCAGCGC
GCGGCCGTGT CGCTCGGCAG CCATCCGTTC GCGGCGTTCT GGCGCGTGTA CGTGCCGCAG
ACCTATCCGG GCGTCGGCGC GGGCGCGCTG CTCGTGTTCA TCCTCGCGAT CGGCTACTAC
ATCACGCCCG CGCTGCTCGG CGGGCCGAAC GACCAGATGG TCAGCTACTA CGTCGCGTAC
TTCACGAACG TGACGATCAA CTGGGGCATG GCGTGCGCGC TCGGCGGGCT GCTGCTCGCG
GCGACGCTGG TGCTGTATGC GGTGTACGGG CGCTTCACGC GCTCGAACGT GAGCCTCGGC
TGA
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| Protein sequence | MTIAPSSPST AALKRELKAA EARKRTMALL LVAPLAIFLL LIFVVPIGTL LTRAVQNPEI
ATALPKTVAA LSGWDRKAPP ADAAYVALAA DMTKVADSEA MGALARRLNT EIPGYRSLVA
KTARAMPLKG DNDAVAALTP AQTRAKLLDL DARWGDAAYW QAIAKNGSQV SPFYLLAALD
HKQDGFGRIV QADPDQSIYL SIFGRTFVIG VAVTLFALLL GYPLAYWIST LSDRRANLVM
ILVLIPFWTS VLVRVAAWIV LLQSEGLINT ALIGSGLISH PLALLFNRVG VYISMTHILL
PFMILPLYSV MKSIPPTYQR AAVSLGSHPF AAFWRVYVPQ TYPGVGAGAL LVFILAIGYY
ITPALLGGPN DQMVSYYVAY FTNVTINWGM ACALGGLLLA ATLVLYAVYG RFTRSNVSLG
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