Gene Bamb_3288 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_3288 
Symbol 
ID4312147 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp75826 
End bp76557 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content72% 
IMG OID638151130 
Productpeptidase M23B 
Protein accessionYP_775177 
Protein GI115358039 
COG category[D] Cell cycle control, cell division, chromosome partitioning 
COG ID[COG4942] Membrane-bound metallopeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.982679 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGAGAAA CGATTCCGAT CCACGAGGCG CTCGCGCGCT GGTTGCCGCA GGCGGCGCTC 
ATCGTCGCGG CCGCCGCGCT GACGGGCTGT ACGATGACGC CGTGGACCGA CAGCTGGCAG
CCGGTGCGGC CGTCGACGCC CATGTCGGCC GCCACGCCGG GCGTGATCGC CGGCTATTAC
CGCGTGAATC CGGGCGACAC GCTCGCCGGC ATCGCCGCCG CCTACGGGCA GCGCGTGCAG
GACCTGGCCA GCTGGAACCG CATGTCGCCC AATGACGCCG TGTCGCCCGG CCAGGTGCTG
CGCGTCGCGC CGCCGCCTGC CGCGACGTCG CTCGGGCAGC CGTCCACCGC GGCGCAACCG
GGTTCGCTGG CATGGCCGGC GACGGGAAGC GTCGCCGCGC CGTTCTCGGC CGGCAGGACG
CGCGGCATCA CGATCGCCGC GTCGGGCCCC GACCATTCGG TGCGGGCCGC GGCAAACGGG
CGGGTGGTCT ACGCCGGCTC CGGCGTCAAG GCGTACGGCC CGCTCGTGAT CCTGAAGCAC
GACAACGGGC TCATCACGGC CTATGGGCAC AACGGCAGAC TGCTCGTCAA CGAAGGCGAC
GCGGTGCGCG TGGGCCAGCC GATCGCCGAG ATGGGCACCG ACGCGAGCGG CCGCTCGACG
TTCGAGTTCG AGGTCCGGCA GAACGGCAAG GTCGTCGATC CGATGAACTT CCTGCCGCGC
AACGGCGGCT GA
 
Protein sequence
MRETIPIHEA LARWLPQAAL IVAAAALTGC TMTPWTDSWQ PVRPSTPMSA ATPGVIAGYY 
RVNPGDTLAG IAAAYGQRVQ DLASWNRMSP NDAVSPGQVL RVAPPPAATS LGQPSTAAQP
GSLAWPATGS VAAPFSAGRT RGITIAASGP DHSVRAAANG RVVYAGSGVK AYGPLVILKH
DNGLITAYGH NGRLLVNEGD AVRVGQPIAE MGTDASGRST FEFEVRQNGK VVDPMNFLPR
NGG