| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3283 |
|---|
| Symbol | |
|---|
| ID | 4312142 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008391 |
|---|
| Strand | + |
|---|
| Start bp | 71392 |
|---|
| End bp | 72288 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 638151125 |
|---|
| Product | NAD-dependent deacetylase |
|---|
| Protein accession | YP_775172 |
|---|
| Protein GI | 115358034 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0846] NAD-dependent protein deacetylases, SIR2 family |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGACA CCACCTTGCA CGACCCCTCA TCCGCCAGCG TCGATCCGGC TGCGCTCGAT
GCGCTGCACA CGTTCGTCGA GCGCCATCCG CGGCTGCTCG TGCTGACAGG TGCGGGCATC
AGCACGGATT CCGGCATTCC CGGCTATCGC GACCACAACG GTCAATGGAT GCGCTCCCCG
CCGATCCAGC TGCACGAATT CCTCGGTTCC GACACGGCGC GCCGACGCTA CTGGGCGCGC
AGCATGATCG GCTGGCCGGT GGTCGGGCGC GCGCAGCCGA ACCGCTCGCA CGTCGCGCTC
GCGCGGCTCG GCGGCGCGGG CCGGATCGAG CGCCTCGTCA CGCAGAACGT CGACGGCTTG
CACCAGCGCG CGGGCAGCGG CGACGTGATC GAACTGCACG GCGGCATCAA CCATGTCACG
TGCCTCGATT GCGGCGCGCA TCACGCGCGC GCGACGATCC AGACCGTGCT CGAAACGGAC
AACCCGGAAC TGCTGGGCGC GCAGGCGGAG CCCGCCGCCG ACGGCGACGC GCACCTCGAA
TGGGCCGCGC TCGACACGTT CCGCATTCCG GCCTGCCCGG CCTGCGGCGG GTTGCTGAAG
CCGGCGGTGG TGTTCTTCGG CGAGAACGTG CCGCGCGAGC GCGTCGCGCT GGCGTCGCAG
GCGCTCGATG CGGCCGATGC GCTGCTCGTC GTCGGCTCGT CGCTGATGGT GTATTCCGGC
TATCGGTTCT GCGTGTGGGC GCAGGCGCGG AACAAGCTCG TCGCCGCGCT GAACCTCGGC
CGCACGCGCG CCGATCCGAT GCTGACGCTG AAGGTCGAGG CGCGATGCGC GCCCGCGCTC
GACGCGCTGA ATGCGCGGCT GGGCGTGTGC GGCGGTGCAC CGGAGCACGC ATCGTGA
|
|---|
| Protein sequence | MNDTTLHDPS SASVDPAALD ALHTFVERHP RLLVLTGAGI STDSGIPGYR DHNGQWMRSP
PIQLHEFLGS DTARRRYWAR SMIGWPVVGR AQPNRSHVAL ARLGGAGRIE RLVTQNVDGL
HQRAGSGDVI ELHGGINHVT CLDCGAHHAR ATIQTVLETD NPELLGAQAE PAADGDAHLE
WAALDTFRIP ACPACGGLLK PAVVFFGENV PRERVALASQ ALDAADALLV VGSSLMVYSG
YRFCVWAQAR NKLVAALNLG RTRADPMLTL KVEARCAPAL DALNARLGVC GGAPEHAS
|
|---|
| |