| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3278 |
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| Symbol | |
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| ID | 4312137 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 66701 |
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| End bp | 69295 |
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| Gene Length | 2595 bp |
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| Protein Length | 864 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 638151120 |
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| Product | MscS mechanosensitive ion channel |
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| Protein accession | YP_775167 |
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| Protein GI | 115358029 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0668] Small-conductance mechanosensitive channel |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGAAT CGAATATTCA TCGACGGAAC TATTCGGCGG CGCGCGCGAT CATGTTAACT
TCCGTCCATC GTCCAGACCG GCGGGCCACG CTTCGACGCG CGCCCGCACG CCTACTCATG
CGACATTTCC TGCTCGGCTG GCTGCTCGCC GCCGTCGTCT CGGCCGCCCA CGCGGCCGCT
CCCGCCCATG CCGCCGCATC GGCCGCCTCC GGCGCCGTGC CCGCGCTGAC GCCGCAACAG
GCGCAGCAGG CGCTCTCCGT CCTGCAGAAT CCGCGCGAGC GCGAACAGGT CGAAACCACG
TTGCGCGCGA TCGCGGCTGT CGGCGTACTG AGCACGCCCG CGCTGCCGGC GAGCGGCGCC
GTGCCGGCCA GCGCGGCATC GGCTGCCGCC ACCCCCGCCG CGCTGACGAC GAACGGGCTC
GCGTCGCTGG TCGTCCGGCA GGGATCGCGC TGGGCCGCCC AAATCGGCGG CGCGCTGCGC
GAATCGCTAA GCTCGCTGCT CGACGTTGGC TCGGTGGGTA ACTGGTGGCA CGAGCGGCTG
GTCCGCCCCG ACGCACGGGC GGACCTCACG CGCGCGATCG GGATCATCCT CGCCGTGCTC
GTGCCGGCGT TCGTCATCGA ATGGTTCGCA AGGCGGCTGC TGCGGCGCGC GCTGGCGGCC
CTGAGCGCGC GTCGCGCCGA ATCGTCGCGC GTGGCCGAAG ACGAGCCAGC CGGGCCAGCC
GAACCCGCCG GGTCCGAGCC GCCCGGCCCG GACGACCACA CACCGCCAGC CTCGACGATC
GACGCCGCCG CCCGGGCGGA CGGCACCGGC AGGCCCGATA CGTCGTCGCA AGGCCGCGGC
CATGCGCGGC GCAACACCAC GCTGCTGCGC CGGATGCCGC GCGCGCTGAT CAGCCTCGCG
CTGCGGGTCG TGCCGCTGCT GGTGTTCGTC GGCGTCGCGA GCCTGACGAT GTCGCTGCTC
GACGACGCCG GCACGCCGAC CGAAATCGCA CTCGAATCGC TGATCGACAT CTACGTGATC
TGCCGCCTCG TGACGATCGT CAGCCGGCTG TTCTTCCAGC CCGATGCGCC GCAGCTGCGG
CTGCTGCACA TCAGCGATGC CTGGGCCGCG TTCGCGCAGC GCTCGATCGC GCGGATCGCG
ATCGTCCTCG GCGCCTGCAC CTCCGCGGTC GAACTCGCCG GAAGCTTCGG CCTCAGCGAC
GCCGGTCACG TCGCGCTGCT TAAAGCCGTC GCGCTCGTCG GCCACCTGAT GATCTCGGCG
CTGATCCTGC GGTGCCGCCA GCCGGTCGCC GCGCGCATCC GCGCGGCCGG CGACGAGCGG
CCGGCCTTCG CGGTGATCAG CAATGCGCTC GCCGACGCGT GGGCACCCGT GTCGGTGTTC
GTCGTGATGG CGTTGTGGTT CGTGTGGGCG CTCGACGTCC ACAACGGCTA CCGCGTGCTG
ATCACGCTCG GCGGCCGCTC GATCGCCGTG ATGGTCGGCA TGCGCATCGT GTCGATCGTC
GTGTTCGGCG CGCTCGCGCG GCTGTTCCAG CGCCGCGACG ACGATCGCAC GCTCGTCCAC
CTGCACGCGT ACCGCTACTA TCCGCTGATG CGCCAGATCG TGTCGGCGGT GATCGCCGTC
GTGACCGTCG TGCTGTTGCT GCAGACCTGG GGCGTGCCGA TCTTCCATGC GTTCGGGACC
GGCACGATCG GCCATCGGCT CGCATCGGCG CTGATCACGA TCGCGATCGC GGCCGTCGTC
GCGCTGCTCG TATGGGAAGC CGCGAACATC GCGATCGAGC GGCGCCTGCA GCTATGGACG
CGCGAAGGCA ACCTCGTGCG CGCGGCGCGG TTGCGCACGC TGCTGCCGAT GCTGCGCTCG
CTGCTGTTCA TCCTGATCGC GCTTGTCGTC GTGCTGACGG GCCTCAGCGA AATCGGCGTG
AACATCGGCC CGCTGCTCGC CGGTGCCAGC ATCTTCGGCG TCGCGCTCGG CTTCGGCTCG
CAGAAGCTCG TGCAGGATTT CATCACCGGG ATCTTCCTGC TGATGGAGAA CGCGATGCAG
GTGGGCGACT GGGTCACGCT CGCCGGCGTG TCGGGCACGG TCGAATACCT GTCGATCCGC
ACCGTGCGGC TGCGCGGGGG CGACGGGTCG CTGTACACGA TTCCGTTCAG CTCGGTGACG
ACCGTCAACA ACACGAACCG CGGCCTCGGC AACGCGGCCG TCAAGGTCAG CATCGCCTAC
GGCCAGGACA TCGATCTCGC GATCGCGACG CTGAAAGAGA TTGGCGCCGC GCTGCGCGAC
GACCCGAACT ACAAGGACGG CATCCTGTCG GATTTCAGCT ACTGGGGCAT CGACCAGGTC
GACGGCGCGA TGATCGCGCT GGCAGGCCAG ATCCAGTGCA AGGACTCGGC ACGCTGGGGC
GTGCAGCGCG AGTTCAACCG GCGGATCGCG GTGATGTTCC GCGAACGCGG GATCCGGATC
GCGAATCCGC AGCGCAGCCT CGTCGCGTAT GACGAAGGTT CGCGACCCGT GGGCCCCGAA
TACGATGGCG ATGCCGCCGA CATGCCTGCC GCCGACACGC ATCCCGCGCC GCCGCCGGAG
CGCAAGCCGA ACTGA
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| Protein sequence | MPESNIHRRN YSAARAIMLT SVHRPDRRAT LRRAPARLLM RHFLLGWLLA AVVSAAHAAA
PAHAAASAAS GAVPALTPQQ AQQALSVLQN PREREQVETT LRAIAAVGVL STPALPASGA
VPASAASAAA TPAALTTNGL ASLVVRQGSR WAAQIGGALR ESLSSLLDVG SVGNWWHERL
VRPDARADLT RAIGIILAVL VPAFVIEWFA RRLLRRALAA LSARRAESSR VAEDEPAGPA
EPAGSEPPGP DDHTPPASTI DAAARADGTG RPDTSSQGRG HARRNTTLLR RMPRALISLA
LRVVPLLVFV GVASLTMSLL DDAGTPTEIA LESLIDIYVI CRLVTIVSRL FFQPDAPQLR
LLHISDAWAA FAQRSIARIA IVLGACTSAV ELAGSFGLSD AGHVALLKAV ALVGHLMISA
LILRCRQPVA ARIRAAGDER PAFAVISNAL ADAWAPVSVF VVMALWFVWA LDVHNGYRVL
ITLGGRSIAV MVGMRIVSIV VFGALARLFQ RRDDDRTLVH LHAYRYYPLM RQIVSAVIAV
VTVVLLLQTW GVPIFHAFGT GTIGHRLASA LITIAIAAVV ALLVWEAANI AIERRLQLWT
REGNLVRAAR LRTLLPMLRS LLFILIALVV VLTGLSEIGV NIGPLLAGAS IFGVALGFGS
QKLVQDFITG IFLLMENAMQ VGDWVTLAGV SGTVEYLSIR TVRLRGGDGS LYTIPFSSVT
TVNNTNRGLG NAAVKVSIAY GQDIDLAIAT LKEIGAALRD DPNYKDGILS DFSYWGIDQV
DGAMIALAGQ IQCKDSARWG VQREFNRRIA VMFRERGIRI ANPQRSLVAY DEGSRPVGPE
YDGDAADMPA ADTHPAPPPE RKPN
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