Gene Bamb_3271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_3271 
Symbol 
ID4312130 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp57216 
End bp58838 
Gene Length1623 bp 
Protein Length540 aa 
Translation table11 
GC content61% 
IMG OID638151113 
Productsulfatase 
Protein accessionYP_775160 
Protein GI115358022 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG3119] Arylsulfatase A and related enzymes 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.755541 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.42944 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCAA TTCTTGTGAT GTACGACAGC CTCAATCGGC ACATGCTCCC GCCTTATGGC 
AACGAGTGGG TCAAGGCGCC GAATTTCCAG CGGCTTGCCG AGCGGAGTGC GACGTTCGAC
AACTGCTATA TCGGCAGCAT GGCGTGCATC CCCGCCCGCA GGGAATTGCA TACGGGGCGC
TACAACTTCC TGCATCGAAG CTGGGGGCCG CTCGAGCCGT TCGACGATTC GATGCCGAAC
ATGCTTCGAC GCGAGGGCAT CCACACGCAT CTGGCCAGCG ATCATCCGCA CTATTGGGAA
GATGGCGGTG CGACTTATCA CACGCGGTAC AGCAGTTGGG AGTTCTTTCG CGGGCAGGAG
GGCGACCCGT GGAAGGGGCA AATCCGGCAG CCGCCGATTC CGGCACGGCT CAAGGGGGCG
CTGAACGAGA AGGCCGCGCG ACAAGACTTC GTCAACCGCC AGTACTATCC GACCGAAGAT
CTCCATCCGC AAACGCTGAC GTTCGACGCA GGCGAGGCGT TCATCCGGGA AAATCACGAT
GCGGATTCGT GGTTGCTTCA GATCGAGACT TTCGATCCAC ATGAACCATT CACCAGTTAT
CCGAAGTATC GCGATCTCTA TCCTCGAACG AATACGGACG CGCATTTCGA CTGGCCACCA
TACGGTCCGG TATCCGGCAA CGAAACCGAC GACGACATTC GGCACGCGCG ATCCGAATAT
GCCGCGCTTG TATCCATGTG CGATCACTCG TTGGGGCGGA TTCTCGACCT GATGGATGAA
CTGAATCTGT GGCAGGACAC GATGCTCATC GTATGCACGG ATCATGGCTA TATGCTCGGA
GAACACGGTT GGTGGGCCAA GACGGCGCAA CCCTGGTTCG ACGAGCTCGC GCATACGCCG
CTTTTCATCT GGGACCCGCG TTCCCGCCGT GCGGGCGTTC GGCGCCAGTC GCTCGTGCAG
ATGATCGACA TCGCGCCGAC GCTGCTCGAT TTCTTCGGCG TGCAAGCGAC GCCGCGCATG
CAGGGCGTGG CGCTCGCGAA AACCGTCGAC GAGGATCTGC CGGTTCGGGA GGCGGCGCTG
TTCGGCATGC ATGGCGAACA CGTCAACGTG ACGGACGGGC GTTACGTATA TATGCGGTCA
GGGCCCGACC CGGACCGCAA CGTGCCGGTG TATGAATACA CGTTGATGCC CACGCACATG
CGCGAGATGT TCAGCGTCGA CGAACTGCAG GATATCGAGT TGGCACCGCC GTTTCCGTTT
TCACAGGGCG TGAGCATGAT GAAGATCGCG AGCCGGCCCA TTGGATATTC GTATCGTGCC
GGAACGCTGC TGTTCGACTT GCAGACGGAT CCCGGACAGG CGCAACCGTT GTACGACGCC
GCCGTGGAGC AGCGCATGGC GACACTCGCC CGGGATCTGA TGCGTGCCAG CGACGCACCG
GCCGAGCAGT ATGAACGTTT GGGTTTGCCG GCCGCGGGCC CGATCGACCA CGATCAACTG
CTTGCCCGTG CCCACGCGGA TCGATCGGAG GCGCTACGTC TGCATCTGGC CACGCGTGCG
CAAGCGATGC GCGCTGAAGT GGAGGGCCGG CGCGTTCGCG CCGAAGCATC GCCGGACCAT
TGA
 
Protein sequence
MKAILVMYDS LNRHMLPPYG NEWVKAPNFQ RLAERSATFD NCYIGSMACI PARRELHTGR 
YNFLHRSWGP LEPFDDSMPN MLRREGIHTH LASDHPHYWE DGGATYHTRY SSWEFFRGQE
GDPWKGQIRQ PPIPARLKGA LNEKAARQDF VNRQYYPTED LHPQTLTFDA GEAFIRENHD
ADSWLLQIET FDPHEPFTSY PKYRDLYPRT NTDAHFDWPP YGPVSGNETD DDIRHARSEY
AALVSMCDHS LGRILDLMDE LNLWQDTMLI VCTDHGYMLG EHGWWAKTAQ PWFDELAHTP
LFIWDPRSRR AGVRRQSLVQ MIDIAPTLLD FFGVQATPRM QGVALAKTVD EDLPVREAAL
FGMHGEHVNV TDGRYVYMRS GPDPDRNVPV YEYTLMPTHM REMFSVDELQ DIELAPPFPF
SQGVSMMKIA SRPIGYSYRA GTLLFDLQTD PGQAQPLYDA AVEQRMATLA RDLMRASDAP
AEQYERLGLP AAGPIDHDQL LARAHADRSE ALRLHLATRA QAMRAEVEGR RVRAEASPDH