| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3259 |
|---|
| Symbol | |
|---|
| ID | 4312118 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria AMMD |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008391 |
|---|
| Strand | - |
|---|
| Start bp | 43127 |
|---|
| End bp | 43630 |
|---|
| Gene Length | 504 bp |
|---|
| Protein Length | 167 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 638151101 |
|---|
| Product | cupin 2 domain-containing protein |
|---|
| Protein accession | YP_775148 |
|---|
| Protein GI | 115358010 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.0115338 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.0903256 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTCT CGTCGCTCCT GAAAGCGATC CTTTGCGTCG CAGCATGCCA CGTTGCCGCA
ACCGACGCTG CCGAGCCACA AACGGCCCCG GCATCGGCAG CAGCTCAACA GGTCATGCAC
GCGGGCAGCC AGCCCTCGAT AGCGGGCCCC GCGGCTTACT TCACCGGCAA GGTACGGATT
GATCCGGTTT GGGCTGCCAA CGGAGACATC AACGCATCGG GCGGTTTGGT GACGTTCGAG
CCGGGTGCGC GCTCGGCTTG GCACACCCAT CCGAAGGGGC AGTACTTCGT CGTCGTTTCC
GGCGTGGGAT ATACGCAGGA ATGGGGAAAA CCAATCCGCG AGCTCCGTCC CGGTGATGTC
GTGTGGTGCC CGCCGGGTGT CAAACACTGG CACGGCGCGG CTCCCGCCAA CGCGATGACG
CACCTCGCTG TCACCGGCAC GGTGGATGGC AAGAACGTCG AGTGGATGGA GAAAGTGACT
GATGAGCAAT ACAACGGCAG GTAA
|
|---|
| Protein sequence | MKVSSLLKAI LCVAACHVAA TDAAEPQTAP ASAAAQQVMH AGSQPSIAGP AAYFTGKVRI
DPVWAANGDI NASGGLVTFE PGARSAWHTH PKGQYFVVVS GVGYTQEWGK PIRELRPGDV
VWCPPGVKHW HGAAPANAMT HLAVTGTVDG KNVEWMEKVT DEQYNGR
|
|---|
| |