| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3258 |
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| Symbol | |
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| ID | 4312117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008391 |
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| Strand | - |
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| Start bp | 42358 |
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| End bp | 43149 |
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| Gene Length | 792 bp |
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| Protein Length | 263 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 638151100 |
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| Product | carboxymuconolactone decarboxylase |
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| Protein accession | YP_775147 |
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| Protein GI | 115358009 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.00392422 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0442906 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCAATA CAACGGCAGG TAAGTCGATC ATTCAGCTCA ACGGGGCCAT TGCTTTGATT
ATGTCTTTGG GATTGCTGGT GGCAGGATGC CACGCAGCTC CCACTACTAC CCAGGAGTCT
CAACAAGTGA CAAGCACATC GATAGCATCG GAAACACTGT CGACTCGCCA GCAGGCCATC
GTCCCGATCG CGGCATTCGC CGCCAAAGGC GATCTTGCCA GGCTGAATGG CGCGTTGAAT
CAAGGGCTGG ACGCTGGCTT GGCCGTCACC GACGTGCGGG AAGTCCTGGT GCAGCTCTAC
GCGTACGCCG GCTTCCCGCG CAGCCTCAAC GCGCTTGGAG AGCTGATGAA GGTGCTGGAG
GCGCGCAGGC AGCGTGGTGT CGAGGATGCA CCGGGTCACG CGCCCAGTCG TCCGATCCCG
ACCGGGGATG CGCTACTTTC TGCAGGCACC GCCATCCAGA CCAGGCTGGC GGGTGGCGCG
GTCAAGGGAC CACTGTTCGA CTTCGCGCCG GCGATTGACG AATACCTCAA GACTCACCTG
TTCGGCGACA TCTTCGAACG CGACAATCTC GATTGGCAGA GCCGCGAAAT CGCGACCGTC
GCAATGTTGG CTGCCATGCC CGGAGTGGAG CCGCAATTAC AAGCGCACAT GCGCATCAGC
ATGAATGTCG GCCTCACGGA AAGCCAACTG CGCCAACTCG GACAAGTCTT GGCTGACCGC
GTGGACGCCG ATAGCGCGAC GCGTGCGCAC GAGGCGCTTG ATAAGCAGGT TGCCGCTAAA
CACGAACGCT AA
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| Protein sequence | MSNTTAGKSI IQLNGAIALI MSLGLLVAGC HAAPTTTQES QQVTSTSIAS ETLSTRQQAI
VPIAAFAAKG DLARLNGALN QGLDAGLAVT DVREVLVQLY AYAGFPRSLN ALGELMKVLE
ARRQRGVEDA PGHAPSRPIP TGDALLSAGT AIQTRLAGGA VKGPLFDFAP AIDEYLKTHL
FGDIFERDNL DWQSREIATV AMLAAMPGVE PQLQAHMRIS MNVGLTESQL RQLGQVLADR
VDADSATRAH EALDKQVAAK HER
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