Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bamb_3235 |
Symbol | |
ID | 4312290 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria AMMD |
Kingdom | Bacteria |
Replicon accession | NC_008391 |
Strand | - |
Start bp | 14251 |
End bp | 15249 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638151077 |
Product | homoserine kinase |
Protein accession | YP_775125 |
Protein GI | 115357987 |
COG category | [R] General function prediction only |
COG ID | [COG2334] Putative homoserine kinase type II (protein kinase fold) |
TIGRFAM ID | [TIGR00938] homoserine kinase, Neisseria type |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0395685 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGTTT TCACCGCTGT TTCCGACTCC GATCTCGCGC AATGGATGCG CCACTACGAA CTGGGCGACG TGCTGGCGTT CCGCGGCATT CCGTCCGGTA TCGAAAACAG CAACTTCTTC CTGACGACGA CGCGCGGCGA GTACGTCCTG ACGATCTTCG AAAAGCTGAC GGCCGAACAG CTGCCGTTCT ACCTCGACCT GATGCGCCAT CTGGCGAGCC ACGGCGTGCC GGTGCCGGAT CCGATCCCGC GCGACGACGG CGCGCTGTTC GGTCTGCTGC ACGGCAAGCC GGCCGCGATC GTCACGAAGC TCGACGGCGC CGCCGAACTC GCGCCGGGGA TCGAACACTG TATCGAGGTC GGACAGATGC TCGCGCGCCT GCACCTGGCG GGGCGCGACT ATGCGCGCTA CCAGCCGAAC CTGCGCAGCC TGCCGTGGTG GCGGGAAAAC GTCCCGGCGA TCGTTCCGTT CGTTTCCGAC GCGCAACGCA CGCTGCTCGA GGGCGAACTC GCGCACCAGG CCGCGTTCTT CGCGTCCGAC GACTATGCGG CGCTGCCGAG CGGCCCATGC CACTGCGACC TGTTCCGCGA CAACGTGCTG TTCGCGCACG CGGCGCCCGG CACCGGTCAT GACGTACGGC TCGGCGGCTT CTTCGATTTC TATTTCGCGG GCTGCGACAA ATGGCTGTTC GACGTCGCGG TGACCGTCAA CGACTGGTGC GTCGACCTCG CGACGGGCGT GCTCGACGTC GCGCGCGCGG ACGCGCTGCT GCGTGCGTAC CAGACGGTCC GGCCGTTCAC GGCCCCGGAG CGCCGCCACT GGAGCGACAT GCTGCGCGCG GGCGCGTACC GCTTCTGGGT GTCGCGCCTG TACGACTTCT ACCTGCCGCG CGCGGCCGAA ATGCTCAAAC CGCACGACCC CGGTCATTTC GAACGCATCC TGCGTGAGCG TATCGCCAAC ACGCCCGCGC TTCCCGAGAC CCATACCGCA TGCAACTGA
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Protein sequence | MAVFTAVSDS DLAQWMRHYE LGDVLAFRGI PSGIENSNFF LTTTRGEYVL TIFEKLTAEQ LPFYLDLMRH LASHGVPVPD PIPRDDGALF GLLHGKPAAI VTKLDGAAEL APGIEHCIEV GQMLARLHLA GRDYARYQPN LRSLPWWREN VPAIVPFVSD AQRTLLEGEL AHQAAFFASD DYAALPSGPC HCDLFRDNVL FAHAAPGTGH DVRLGGFFDF YFAGCDKWLF DVAVTVNDWC VDLATGVLDV ARADALLRAY QTVRPFTAPE RRHWSDMLRA GAYRFWVSRL YDFYLPRAAE MLKPHDPGHF ERILRERIAN TPALPETHTA CN
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