Gene Bamb_3233 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_3233 
Symbol 
ID4312288 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp12820 
End bp13272 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content68% 
IMG OID638151075 
ProductMarR family transcriptional regulator 
Protein accessionYP_775123 
Protein GI115357985 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.550723 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0343876 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCGCC TCCCCCCCCT GCCCCAGACG CTCGACGACC AACTCTGCTT CGCGCTCTAC 
TCGACTTCGC ATGCGATGAC GAAGGCGTAC AAGCCATTGC TCGACAAGCT GTCGCTGACC
TATCCCCAAT ATCTGGCCAT GCTCGTGCTG TGGGAACGGG ACGACATCGC GGTGAAGGAC
ATCGCCGCCC GCCTCGACCT CGACCCGGCC ACCGTCACGC CGCTGCTGAA GCGGCTCGAG
GCGCTCGGCT ACGTCGAGCG CGTGCGCAGC GCGACGGACG AGCGCGTCGT GAACGTGCGC
GTGACCGCGG AAGGCCGCGC GCTGAAGGTC AAGGCGCGCT CGGTGCCCGG CGATCTCTTT
TGCGCGATGC AGCAAACCCC CGAGTTTCTG GTCAGGCTGC GCGCGGATCT CCAGCAGCTG
CGCGACGCGC TGGCGGCCGC CAACGAAGGC TGA
 
Protein sequence
MDRLPPLPQT LDDQLCFALY STSHAMTKAY KPLLDKLSLT YPQYLAMLVL WERDDIAVKD 
IAARLDLDPA TVTPLLKRLE ALGYVERVRS ATDERVVNVR VTAEGRALKV KARSVPGDLF
CAMQQTPEFL VRLRADLQQL RDALAAANEG