Gene Bamb_3220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamb_3220 
Symbol 
ID4312205 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria AMMD 
KingdomBacteria 
Replicon accessionNC_008391 
Strand
Start bp1434 
End bp2213 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content74% 
IMG OID638151062 
Producthistidine kinase 
Protein accessionYP_775110 
Protein GI115357972 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.329298 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGTCCA TTCCCGTCGA CCCTGCCGCC GACCTGCTGC GCGAACGCGC AGCGCACTAT 
GCCGCCGAGG CCGCGCTGTT CCTGCGCGAC CAGGCGCTTT CCACCGCGTC GCACGACCTG
CGCAGCCCGC TGAATGCAAT GCACAGCTGG GCGTACGTGC TCGAGCGCCA GCTCGCGAGC
GCCGACCCGA GCCTGCAGCG CGCGCTCGCG GGCATCCGCA CCGGGATCGA TCAGCAGGTT
GCGCTGATCG ACGACGTGCT CGACGCGCCG CGCGCGGAAA CGCGCACGCT CGCGATCGCC
GCGCAGCCGT TCGCGCTGCG CCCGCTGCTC GACGACACGC TCGCGCTGGT GCGCTTCGCG
CTCGCCGACG CGCGGCAGGT GAGCATCGAT GCGACGCTGC CCGACGGCGA GCCGTCACTG
CGCGCCGATC GCGAACGCCT CGCGCAGGCG CTCTGGACGA TGCTGACGAC GGCCGTCGAA
GCCAGTGCCG CCGGCAACCG CGTGACGTTC GCGTGCACGC GCGACGGCGC GCAGTGCGTC
GCGCATGTCA CCTGCGGCGT GAGCGCCGCC GCGCTCGCCG ATCCGGCGCT GCCGCACGCG
TTCGACGCGT TCGCCCGTCG CGAGATGCTG CGCTCGCGCG ACGCGAAGCG CGTCGCGTGG
GTACTCGCGC TGTGCCAGCG TGTCGCGCTC GCGCACGGCG GCACCTTCAC GCACGCTGCG
TTCGCCGACG GCGCCGTCGT CACGCTGTCG CTCGCGGTTC CCTGCGAGGC GGCGGGCTAA
 
Protein sequence
MTSIPVDPAA DLLRERAAHY AAEAALFLRD QALSTASHDL RSPLNAMHSW AYVLERQLAS 
ADPSLQRALA GIRTGIDQQV ALIDDVLDAP RAETRTLAIA AQPFALRPLL DDTLALVRFA
LADARQVSID ATLPDGEPSL RADRERLAQA LWTMLTTAVE ASAAGNRVTF ACTRDGAQCV
AHVTCGVSAA ALADPALPHA FDAFARREML RSRDAKRVAW VLALCQRVAL AHGGTFTHAA
FADGAVVTLS LAVPCEAAG