| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3213 |
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| Symbol | trmE |
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| ID | 4310489 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | - |
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| Start bp | 3551401 |
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| End bp | 3552870 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638151055 |
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| Product | tRNA modification GTPase TrmE |
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| Protein accession | YP_775103 |
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| Protein GI | 115353264 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0486] Predicted GTPase |
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| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00450] tRNA modification GTPase TrmE |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCGGCGT CCCGATGCCC GACTGTTGTG CGGGCACACC ATTCATTGTC TGCTTACCCG
ATTCGTCCGA TTCCCATGCT CGCTACCGAC TCCGATCCGA TCGTCGCCAT TGCCACTGCT
GCCGGCCGGG GCGGTATTGG CGTCGTCCGC GTGTCGTTCG GGCGCGGCGG CGAGGCGGCC
GCGCTGCCGC TGATCGACGC GTTGTGCGGG CAGCGGCTCG CGCCGCGCCA TGCGAGCTAC
GTGCCGTTCG TCGACGAGCA CGGCGCGCCG CTCGACCGCG GGATCGCGCT GTATTTCCCC
GCGCCGCATT CGTACACCGG CGAGCACGTG CTGGAACTGC AGGGACATGG CGGACCGATC
GTGATGCAGC TGCTGCTGCA GCGCTGCCTG GATGCAGGGC GCGGCTTCGG GCTGCGGCTC
GCGCAGCCGG GCGAGTTCAC GCGGCGCGCG TTCCTGAACG ACAAGCTCGA TCTCGCGCAG
GCCGAGGCGG TCGCCGACCT GATCGAGGCG AGCACCGAAG CGGCGGCGCG CTCGGCCGGG
CGCTCGCTCG ACGGCGCGTT CTCGCGGCAG ATTCATGCGT TGGTCGAGGA CGTGATCACG
CTGCGGATGC TGGTCGAGGC GACGCTCGAT TTCCCGGAAG AAGAAATCGA CTTCCTGGAA
GCGGCCGATG CGCGCGGCAA GCTCGCGAAG ATCCGCGAGC AACTCGCGCA CGTGCTCGGC
GACGCGCGAC AGGGTGCGCT GCTGCGCGAG GGGTTGTCGG TCGTGCTGGC GGGGCAGCCG
AACGTCGGCA AGTCGTCGCT GCTGAATGCG CTCGCCGGCG CGGAGCTGGC GATCGTCACG
CCGATCGCGG GCACGACGCG CGACAAGGTC GCGCAGACGA TCCAGGTCGA GGGGATTCCG
CTGCACATCA TCGATACGGC CGGGCTGCGC GAGACGGAGG ACGAAGTCGA GCGGATCGGG
ATCGCGCGCA CCTGGAGCGA GATCGAGCGC GCGGACGTCG TGCTGCATCT GCTCGATTCA
CGCACGGGGA TGACGGCGGA TGACGAGGTG ATCGCCGCGC GGTTTCCGGG CGGCGTGCCG
GTGGTGCGCG TGCTGAACAA GACGGACCTC ACCGGCGTGC CGGCGTGCGT CGAGCATCCG
GCGGCGGCAG GCGATCTGAC CGAGGTACAT CTCTCGGCGA AGCGCGGCGA CGGGATCGAC
ATGCTGCGCG CGGAGTTGCT GCGGATCGCC GGGTGGCAGG CAGGGGCCGA AGGGGTGTAT
CTCGCGCGCG AGCGGCATCT GATTGCGCTG CGGGCCGCGC AGGAGCATCT TGCGCAGGCG
GCGGATCATG CGGAGCAACG TGCGCAGTCG CTCGATCTGT TCGCGGAGGA GCTGCGGCTC
GCTCAAGAGC AACTCAATGC GATTACCGGG GAATTCACTT CCGATGATCT GCTGGGGGTT
ATCTTTAGCC GGTTCTGTAT CGGGAAGTGA
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| Protein sequence | MPASRCPTVV RAHHSLSAYP IRPIPMLATD SDPIVAIATA AGRGGIGVVR VSFGRGGEAA
ALPLIDALCG QRLAPRHASY VPFVDEHGAP LDRGIALYFP APHSYTGEHV LELQGHGGPI
VMQLLLQRCL DAGRGFGLRL AQPGEFTRRA FLNDKLDLAQ AEAVADLIEA STEAAARSAG
RSLDGAFSRQ IHALVEDVIT LRMLVEATLD FPEEEIDFLE AADARGKLAK IREQLAHVLG
DARQGALLRE GLSVVLAGQP NVGKSSLLNA LAGAELAIVT PIAGTTRDKV AQTIQVEGIP
LHIIDTAGLR ETEDEVERIG IARTWSEIER ADVVLHLLDS RTGMTADDEV IAARFPGGVP
VVRVLNKTDL TGVPACVEHP AAAGDLTEVH LSAKRGDGID MLRAELLRIA GWQAGAEGVY
LARERHLIAL RAAQEHLAQA ADHAEQRAQS LDLFAEELRL AQEQLNAITG EFTSDDLLGV
IFSRFCIGK
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