| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Bamb_3212 |
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| Symbol | |
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| ID | 4310488 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria AMMD |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008390 |
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| Strand | + |
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| Start bp | 3549525 |
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| End bp | 3550883 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 638151054 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_775102 |
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| Protein GI | 115353263 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAAGGTA TCCTGATCCA GCATACGACG CGTCGTCAGC TGTGGTTCGG CGCGCTCACG
GCACTGGTGA TCGTGCTCGC GCTCGGGATC GCCGCGCCAC ACGCGAACGT CGCGCTGCCG
GCCGTCGAGC CGTTCATGCC GATGTGCGCG CTGACCGTGT TCACCACCGC GAGCATCGCC
GCATTCTTCC TTGGCGCGCA GTTCACCGTG ACGCGCCAGC CCGTGCTCGG CGCGCTCGGC
GGCGCCTATG CGTTCACCGC ACTCGCCGTC GCGCTGCAGC TGCTGACCTT TCCCGGCGTG
TTCGCGCCGC ATGGGCTGTT CGGCGCACAA CCGCAAAGCG CCGCGTGGAT GTGGATCTTC
TGGCACGCGG GCTTCCCTGG TTTCGTCATG GTCGCGCTGC TCGCGCGTGC TCGGCTGGCG
CGCGCGCCGA TCGGCGCTCG GCAGACGCGC TGGTGGACGC TCGCGCTGGT CGGCGGGCCC
GCTGTCACCG CCGGCGTGCT GTGCCTGTTC GCGCTGAACG TGTCGCTGCC GCCTGCGTTT
CGTCCGCCGG GCAATGCGGC CGTGCTGCCC GTCAACGGCG TCGCGCTCGT CGTGTGGACA
CTCAATGCGC TGGCGCTCGT CGCGGTGCTG GTCTCCGGCC GGCTGCGCAC GACCCTCGAC
CTCTGGCTCG CGATCGCGGT GCTCGCGTGC CTGACCGATA CGACGCTGAA CCTGTTGAGC
ACCCATCGTT TCACGATCGG CTGGTATCTC GCGCGCGTGT TCAGCATGTT CACGCCGGGC
ATACTCGTGT GCGTGCTCGC CTGGGAAGTG ACGATGCTGT ATCAGCGGCT GTTCGAGGCG
CACACGATGC TCATCCGTTC GTCCGCACGC GACGGGCTGA CGGGCGCGTT CAACCGCAGC
CACTTCAACG ATCACTTTCA CACGCTGTTC CTGCAGGCGC GGCGACAGGG CGAACCGCTG
TCGCTGCTGA TGGTCGACGT CGATCACTTC AAGGCATACA ACGACGCGTT CGGTCACGTG
AAGGGCGATG CGTGCCTGAT CGCGGTCGCG AATGCGTTGG CCGGCGCGGT GCGGCGGCCG
GCGGATATCG TCGCGCGCTA CGGCGGCGAG GAGTTTGCGA TCGTGCTGCC GAACACCGGT
GCGCGCGGTG CGCGGCTCGT CGCCGAGGAA GCGCGCGAAG CCGTGCTGCG GCTCGATCTC
GCGATGCCTT CGTCGCCGGC CGGACGCGTG AGCGTCAGCG TTGGCTGCGC GACCGTGTCG
GCCGCCGAGC TGTCGACGCC CGATGCGTTG GTCGAAGCCG CCGATGCCGC GCTGTACCGC
GCAAAGGATG GGGGGAGAAA CCGCGTCGTC GCGGCGTGA
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| Protein sequence | MEGILIQHTT RRQLWFGALT ALVIVLALGI AAPHANVALP AVEPFMPMCA LTVFTTASIA
AFFLGAQFTV TRQPVLGALG GAYAFTALAV ALQLLTFPGV FAPHGLFGAQ PQSAAWMWIF
WHAGFPGFVM VALLARARLA RAPIGARQTR WWTLALVGGP AVTAGVLCLF ALNVSLPPAF
RPPGNAAVLP VNGVALVVWT LNALALVAVL VSGRLRTTLD LWLAIAVLAC LTDTTLNLLS
THRFTIGWYL ARVFSMFTPG ILVCVLAWEV TMLYQRLFEA HTMLIRSSAR DGLTGAFNRS
HFNDHFHTLF LQARRQGEPL SLLMVDVDHF KAYNDAFGHV KGDACLIAVA NALAGAVRRP
ADIVARYGGE EFAIVLPNTG ARGARLVAEE AREAVLRLDL AMPSSPAGRV SVSVGCATVS
AAELSTPDAL VEAADAALYR AKDGGRNRVV AA
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